EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-10653

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr3:116138810-116140410

Target genes

Number: 7
Name	Ensembl ID

Cdc14a	ENSMUSG00000033502
Rtcd1	ENSMUSG00000000339
Dbt	ENSMUSG00000000340
Lrrc39	ENSMUSG00000027961
Sass6	ENSMUSG00000027959
Ccdc76	ENSMUSG00000033439
Hiat1	ENSMUSG00000089911

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr3:116140017-116140038	TCTTACTTTCAATTTCCCTTT	+	7.39
SOX10	MA0442.2	chr3:116139397-116139408	AAAACAAAGCA	+	6.02
SPI1	MA0080.4	chr3:116139223-116139237	AACTTCCTCTTTCC	-	6.31
Sox3	MA0514.1	chr3:116139412-116139422	AAAACAAAGG	-	6.02

Enhancer Sequence

TAAGTTTTAA GGTCTATTTT ATTTTTGATT ATGTGTATCT GTGTGTGTGT CTGCACATCA 60
GCACAGGTGC CCATAAAGGC CAGATATGTG AGGTTCCTTG GAGTAGGGTA TAGATGTTGT 120
AAGGCTCCAG ACATGGATGC TGGGGCTTGG TCCCCTGGGA AGGAGCACAA GGTCTTCACC 180
ACTCAGCATT CCTCTCACTC CTCTTGAAAT GTCATTTTTT AACAAATCAA AATTAGGGCA 240
TCAGTGGGTA TTCAAAAAGC ATTTTAATAT GCCTCAGAAT GAAGGGCCAT GTCCTTGCAA 300
GACTCCATTT CTGAATGACA TTAGCAGGTT ATCACAAGCA GGTGCCGAGT CTCGGATGTA 360
AGAAACACCA CTCTGTTACC AGGCACAGGA AACCTCACTT TGTGTCTTGG CCAAACTTCC 420
TCTTTCCGTT ATGCCAAATT CACCCCAACC CCCAGAGACT TTTTTCTTTT CCAAATAGGC 480
ATTTGTAGGG GGTACAGTGA CACAACATGT ATGTGAAATC CCAGCTCTCT GAAAGGGAGG 540
TGGGAGGGTG GTGCATTGAA ATCAGCCTAG GCTACATAGT GAAAACAAAA ACAAAGCACT 600
TAAAAACAAA GGGGAGAGAG AGAGAGAAAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG 660
ATTGATTCAC CAGCTCACCA ATGTCCAAAT GTATAAACCT CTGTGGTGGA TGTGACATCC 720
ATGACAATAG GAACAAATTA AAGACGTCTC TGAGCCAAGG ATAACCCCCC AGAACTGTGA 780
GCCAGTGCAT GGTGATGCCA TCTTCTGAAA CAGAGCCATG GGGTGTCCTT GGGGGAACCA 840
GGGACTCCAA CCTTGGTTTG TATTAGGTAG AATTTGAAGT ATCTACTGGA CAATGAAGTG 900
GAGACCTGTG TGAAGCACTT GGGGATATAG ACTTGGTTCT GATGCTCAGG AGAGCTGAAT 960
GCGATTGACT GGTCAATGTG AGAGACTCTC CAATGGCACA ACAGACATTT CCGAAAACAG 1020
AGAGGCGGGA AACGTGGGCT CTGGAGACAG ACTGTTGAGC CCCAGTGCCT TCTGGGTAAC 1080
CTTTTGACTT TCTGTGAGCC AAATCTGCAT TCTCAGTTGA TAAAAACACA GCGGTTTTCA 1140
GCACAAGGTC CCATGGAGAG CATGAAGTTA GACTGTGCAC AAGCTCGCTG CTAATAACTA 1200
TGTTCTTTCT TACTTTCAAT TTCCCTTTCC CATCAGCTCA GGAACTCCTG TCTCTCTACT 1260
TCTCTCTTTT TACATTTTTA CTCATTATTA TTGTATGTGT GCATGCTATA ATACATGTGT 1320
GGGGCAGTCA TGCCAGGGTG CACATGTGTG CAAGCTAGAG GACAGTGCCG ATGAAGTCAG 1380
TTTTCTCCTA TCTTTCCATG AACTCCAAGG ATTGAACTCG GGTATCCAGA CCCGTGCAGC 1440
CAGCTCCTCT GTCCACTGAG CCAGAGACAG AGTCAAAGCT TTTTCTCCTT GCCACATGAT 1500
TGATGCCTTA GAACTCTATT ATGCAAGGCT TGTTGTGTCA GTGATTGGTG TACTAAACTG 1560
GCCCAGTGTT TTGGCAACCA TGTTAACATT TTAAGATGTG 1600