EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-10652

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr3:116101550-116102110

Target genes

Number: 5
Name	Ensembl ID

Cdc14a	ENSMUSG00000033502
Rtcd1	ENSMUSG00000000339
Dbt	ENSMUSG00000000340
Lrrc39	ENSMUSG00000027961
Ccdc76	ENSMUSG00000033439

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BHLHE41	MA0636.1	chr3:116101667-116101677	GTCACGTGAC	+	6.02
BHLHE41	MA0636.1	chr3:116101667-116101677	GTCACGTGAC	-	6.02
Foxj3	MA0851.1	chr3:116102056-116102073	AGGTTTGTTTACCTCCA	-	6.35
RUNX1	MA0002.2	chr3:116101588-116101599	AAACCACAGAC	-	6.62
USF1	MA0093.2	chr3:116101666-116101677	GGTCACGTGAC	-	6.14
USF2	MA0526.2	chr3:116101663-116101679	CTGGGTCACGTGACGG	+	6.36

Enhancer Sequence

ACATACACAG ATCATGCACT TGATCCGTTT ACATCAGGAA ACCACAGACC CTGTAACCAT 60
CCAACAGCAA ACTCTGATGC AAGGAAACGG CAAAGCTAGA AGACCCAGAG TTCCTGGGTC 120
ACGTGACGGC TCGTGCCCTC TTCGGCAGCC TCGCGATGAT GAAGTTGCTC ACCGTGCTAG 180
AAGTAAAATA TTGGAGTCGT TTGGCTAGTA TGCCTAATTA AACTCTGCAG GTCAATCTGA 240
CTGGAGTAAG AAAGATCCAA CACAGCCAGA TTAATATACT CCTTAATAAG AAACACAGCC 300
CATGCACAGC AAGCAAGCGT TGCCAGGGAC CATGTCCGAT TAAGGAGAAC ACAGCGCAGG 360
GACCGTGGTG GCCAAGGCAT CATCCATTCT CTTACAGGTG ACTCCGTTAG CCTAGTAACA 420
GCCATGACAA TGAGCACCTC GCCAGCCATC AGGGGTCACT GCCAAAGCAA GAAAGGGAAC 480
ATATCTTCCA GGGAGCAGCC AGGACTAGGT TTGTTTACCT CCAACTTTCT CAGGAAAGGG 540
ACATTCTTGA ACATTTTCTT 560