EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-10447

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr3:89882900-89883440

Target genes

Number: 14
Name	Ensembl ID

Il6ra	ENSMUSG00000027947
Atp8b2	ENSMUSG00000060671
Hax1	ENSMUSG00000027944
4933434E20Rik	ENSMUSG00000027942
Ubap2l	ENSMUSG00000042520
1700094D03Rik	ENSMUSG00000078667
Tpm3	ENSMUSG00000027940
Nup210l	ENSMUSG00000027939
Rps27	ENSMUSG00000090733
Jtb	ENSMUSG00000027937
Creb3l4	ENSMUSG00000027938
Slc39a1	ENSMUSG00000052310
Crtc2	ENSMUSG00000027936
Slc27a3	ENSMUSG00000027932

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr3:89882901-89882912	ATGACCTTGAA	-	6.62
Esrrg	MA0643.1	chr3:89882901-89882911	ATGACCTTGA	-	6.02
Nr5a2	MA0505.1	chr3:89882900-89882915	GATGACCTTGAATTT	-	6.77
SP1	MA0079.4	chr3:89883373-89883388	CAAACCCCGCCCCCT	+	6.49
SP2	MA0516.2	chr3:89883372-89883389	CCAAACCCCGCCCCCTT	+	7.08
SP4	MA0685.1	chr3:89883373-89883390	CAAACCCCGCCCCCTTT	+	7.15

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07586

chr3:89882713-89888321

Intestine

Enhancer Sequence

GATGACCTTG AATTTCTGCT CTTTCTGTCT CACCCACTAA GTACCGAATG GTACTTATGG 60
ATACGTGCCA CTAGGCTAGT TTAAGTGCTC CTGGAGATTC AGCCCAGGGC TTCGAATGTG 120
CTTGGCTAGT GCTTTACAAA CTGAGCAATA TCCACAGCTC CTCCTAATAG ATTTTCAAAG 180
GACCTCACTG GGACTCCTTG CAAGGTGAAG GCTAGAGTCT TCTGTCTAGG CTTGTCTCAG 240
AACCTGGTTT TGGAATCTGT CCTAGACTGA GTAGAAGTGG AAGCACATGG GATATTTTAA 300
ATTGCGGAGC GGGAGCAGAC GCAGTGGTAG GGAGGCACCG GATAAGAGAG GGGTCAACTG 360
CGTAAGTGTT CACGACAGCA CCATTTTAGT AAATGGGACA GCCATTGTTA CGAGACAGCC 420
TGGTGGGTGA GGCTAGACTA TGAAGCGCCT CTCAGTTACT ATGGTAGCCT TACCAAACCC 480
CGCCCCCTTT ACTGGACTAA GGAAAGACGG CCCTGAGTGG TCGCCTAGGG TTACTGGGAG 540