EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-09591

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr2:121989020-121990370

Target genes

Number: 8
Name	Ensembl ID

Ctdspl2	ENSMUSG00000033411
Eif3j	ENSMUSG00000027236
Spg11	ENSMUSG00000033396
B2m	ENSMUSG00000060802
Trim69	ENSMUSG00000033368
Patl2	ENSMUSG00000027233
Sord	ENSMUSG00000027227
Shf	ENSMUSG00000033256

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr2:121990185-121990206	GAAAAGAAACTGAAAGCATGG	-	7.12
IRF9	MA0653.1	chr2:121990187-121990202	AAAGAAACTGAAAGC	+	6.04
Myod1	MA0499.1	chr2:121989657-121989670	AGCAGCTGTTTCC	+	6.14

Enhancer Sequence

ATAAAGTGCT AGTGAAAATT GAGCTTTTCT TGGTGGGGGG TTGGCGGCGG TTTCGAGACA 60
GGGTTTCTCT GTGTAGCCCT GGCTGTCCTG GAACTCTGTA GACCAGGCTG GCCTGGAACT 120
CAGAAATCCG CCTGCCTCTG CCTCCCGAGT ACTGGGATTA AAGGCGTGCG TCATCACCGG 180
CCGGTGGGCT TTTTGTTTTT GAATGGTGAA ATAATAAAAA TAATGATTTT CCCTTCAAAA 240
GAACCTCTCA TTCTTTGTAA AGTCAAAACT GTAACGAGGG AACCATGAGT GCTCGCCAAT 300
GCCTGTAATC CTAGCACGTG GGCAGGCACG TGGGAGGGCA CAGGCAGGAA GCTTTTGAGT 360
TTGAGGGAAG CCTGGGCTAT AATTTGAGAT CCTGTCCCAA AGGAACAAAC AACTAACTCA 420
AGGAGAATGA AAAAGACAGG AAAAAAAAAA AAGCAAAATG CCAGACAACC CTTCAACCCC 480
TTTAAGATGA AGTTAGAGGC TTTAAGGAGC TTGGGCACCA GCTTAGGAAA AATCTTTACA 540
GAATACAGTA AAGGCCAAGC AAAATGTGTG AGGGACGAGG AATGCAAACC TTGCAGAAAG 600
AGAGTTTCCA GGAAGTGCTC GTTACACCAG GCAGCAGAGC AGCTGTTTCC CTAGAGCAGG 660
CAGTCACAAG GATCTAAGAT GTAGGACAGC AGACTCCACC TGGGGGAGGT GGAGTGGAGG 720
AGACACAGTA AGCCAAGCAG CAGGACTGTT CTGGTGGGGA GAGCTCATGT GTGTGCTGTT 780
TCAAAAAGAA ACCAACCTCA ATTATGGACC CGCCTTCATG TTCCTGTTAG ACTTTTCTAA 840
ATAGATGACT CGGGAAGAAC TCAACCTCCC TTAAAATATC TGAAGAAACA GAGAAACTGG 900
GCCTGGAGCA AGGGCTCAGT GCCTAACTGG TGAGCCCAGG ACAATGGCAT GCTGTCTCAA 960
AGGGGTAGAC TGCACTCCTG AGGATGGCAC CTTAGGTTCT TCCAGCACCA CTCCCCCACC 1020
CCCACCCCCA TAAAAAGTTA GTGGCAATTA TAAAATAAGG AAGGGATAAC ATTTTTCAGC 1080
GCAAAGAAGG AGAGCCACGG CATGGGAGAA CATGAACGTG GGCAGACAGC AGGATCTCCA 1140
AAGCCTGCCC AGTGGGTGTT TCAGGGAAAA GAAACTGAAA GCATGGCATG GTGGCTCATG 1200
CCCTAAACCC CAGTCCCAGT CAGGAGGCTC ACTGCTGACT CACTGATACA GTGGAAGGCA 1260
GGCGCTCGCT CGCTCGCTCG CTCGCTTGCT CGCATAGAGC TGGCTCTGGG TGCCTAAGAG 1320
CAGTATCAGC TCCACAGATG CTGAGATGGA 1350