EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-09039

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr2:32364690-32366120

Target genes

Number: 20
Name	Ensembl ID

Prrc2b	ENSMUSG00000039262
Swi5	ENSMUSG00000044627
Ciz1	ENSMUSG00000039205
Dnm1	ENSMUSG00000026825
1110008P14Rik	ENSMUSG00000039195
Lcn2	ENSMUSG00000026822
Ptges2	ENSMUSG00000026820
Naif1	ENSMUSG00000039164
Slc25a25	ENSMUSG00000026819
Fam102a	ENSMUSG00000039157
Dpm2	ENSMUSG00000026810
Pip5kl1	ENSMUSG00000046854
St6galnac4	ENSMUSG00000079442
St6galnac6	ENSMUSG00000026811
Ak1	ENSMUSG00000026817
Eng	ENSMUSG00000026814
Fpgs	ENSMUSG00000009566
Sh2d3c	ENSMUSG00000059013
Ttc16	ENSMUSG00000039021
1700019L03Rik	ENSMUSG00000038987

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr2:32364970-32364985	GAGGTCATAGGGTCA	+	6.04
Rarb	MA0857.1	chr2:32364969-32364985	AGAGGTCATAGGGTCA	+	6.66
ZNF263	MA0528.1	chr2:32365670-32365691	GGAGCAGGGTGAGGAAGAAGA	+	7.38

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01404

chr2:32342475-32443798

Th_Cells

Enhancer Sequence

GAAGAAACGG AAGTTATGGT CAGCCCACCT TTGTGAAGTA TTATGAGTTT AGAACAGGCG 60
CTCCCACACT TTGGGGCTAG TAATACTGGC TCTACTCCAC ATCTGGGAAA ACCACAGGTA 120
GGAAGGCCAA ATGGCTGAGC CAAGGTCACA GAGCCAGGTC TGACCCCACT GCCCCACTTC 180
ATCCCAAATC CCAACTCCCT CAAACCCCAC TAAAGAACTC TCCAAGGCTG CCTCACGTGA 240
GGTCTGTGGT CAATTTACCC TCTTTTCTGG CTTCCTGCCA GAGGTCATAG GGTCACACTT 300
GAAAGACTTC CTCCAACCCT GCAAGTCATC ACTCTGGAGG ATTCTGCCTG AATTAGAAGC 360
AGGAACCATT TCCTATATGC TGCAAAAGGG CGCGGGATGA ACTGGGGCAG CATTCCAACC 420
TCTTAACAAT GTGTGTCCCT TCCTCCCACC CGTGCCCCAG GAAGGAAACA GGCAAGTGTG 480
CAAAAATGCA CATACAAGCT GGAGTGTACA CAGAAACATA TCAAATAAAG TGATGCTCTC 540
AATACTTGTC GGTCGCACTA CATGGTCATT AACAATCATA ACGTAAGGGG TTGTGAGAGA 600
GCCAGGCACT TGTTGCAAGT CTGATTGCTA CCATTCAGGG GTCTTAACTG GGTGAAAAGT 660
CAGGGGAAAA AATCAGGTAT CATTGGAGCA ATCTGAAACA CAGAACAGAA GCACACAGAC 720
AGCATTGAAA GGCTCGTATT AGGAGTAAGG AGACAGACAT AGCAGACACA CAGAGAAAAA 780
GACACTCTGC ACGGCAAAAA AGAGACTCAG GGAGCTGAGT CTAGCTTCCT GAGGCCTGGG 840
AGTTTCTAAG GTCTTTGAAG GCGTTTCCTT CCCCTGGTTT AGGCTTGATC AGCTCCCAGC 900
TGCTGTGTAA ACACATCTGA TCCGGCCTTG TAAAGCCCAA AGGGCCTTTG TTTAAGTTGC 960
AAGGTTTTTG TCCAAGGTCG GGAGCAGGGT GAGGAAGAAG ACGGCCATCT TGGAAGTTCC 1020
CAGCCCTTCT CCCTGGCCAT CTGCCTTTTA GAGAACCTGT GTGACTCCTA GTCCTTCAAT 1080
CCTGGGCCCT ACCTGTTGTA AGGCGAGAAC GGACTCCTGA AAGTAGTCCT CTGAGCATGT 1140
CCACGTGTAC AGAGAGACAC ACGTTCTGGG GGACACTTAC GCCTATGTAC ACACAAAACT 1200
TAAAGCAATT TAAAATGGAA ACAGTTTTAA AATATGTAAC GGGATGAAGA TGTGGCTCAG 1260
TGGGTTTGTG ACACAAGTGT CAGACCTGAG TTTAATCTTC AGATTACATG TAAAAAATGC 1320
AGGCGTAGGT GTGCTGGGGA GGCAGAGATC TTGGAACTCC CCACCCAGCC TCGTCCAGTT 1380
GGGGAACCCC AGATCTCAGC AACCTGGAAT AACAACAGAG AGTGAACTCT 1430