EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-08318

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr19:4189510-4189860

Target genes

Number: 19
Name	Ensembl ID

Ndufv1	ENSMUSG00000037916
Gstp1	ENSMUSG00000060803
BC021614	ENSMUSG00000058216
Cdk2ap2	ENSMUSG00000024856
Pitpnm1	ENSMUSG00000024851
Aip	ENSMUSG00000024847
Cabp4	ENSMUSG00000024842
Coro1b	ENSMUSG00000024835
Ptprcap	ENSMUSG00000045826
Rps6kb2	ENSMUSG00000024830
Carns1	ENSMUSG00000075289
Tbc1d10c	ENSMUSG00000040247
Ppp1ca	ENSMUSG00000040385
Rad9	ENSMUSG00000024824
Clcf1	ENSMUSG00000040663
Pold4	ENSMUSG00000024854
Ssh3	ENSMUSG00000034616
Adrbk1	ENSMUSG00000024858
Kdm2a	ENSMUSG00000054611

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr19:4189598-4189616	CCTTCCTTCCTTTCTTTT	-	6.98
EWSR1-FLI1	MA0149.1	chr19:4189594-4189612	TTTTCCTTCCTTCCTTTC	-	7.66

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_00607	chr19:4184779-4204432	pro-B_Cells
mSE_01389	chr19:4185126-4244466	Th_Cells

Enhancer Sequence

TACCTGTGGG TGAGGTCAGA TGCATTAGGG TTTCTTCTGC TCTCTTGCTC TCAGGCACAG 60
CTTGCTTGCT TCTTTCTTTC GGTCTTTTCC TTCCTTCCTT TCTTTTTTTG GTTTTTGGAT 120
ACAGGGTTTC TCTTTATAGC CCTGGCTGTC CTGGAACTCA CTCTGTAGAC CAGGCTGGCC 180
TTTAACTCAG AAATCCGCCT GCCTCTGCCT CCCAAGTGTT AGGATTAAAG GTGTGCGCCA 240
CCATTGCCCA GCTCTAAGCA CAGCTTTTCT TTGGTCAAGA GTCCACTTGG GAAGCAGAAG 300
CAGGGGGATT GAGAACTTTG GGAACCAGTG TATGTACACC TCTTTTTCCT 350