EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-07968

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr18:34943020-34943820

Target genes

Number: 11
Name	Ensembl ID

Nme5	ENSMUSG00000035984
4933408B17Rik	ENSMUSG00000049357
Brd8	ENSMUSG00000003778
Cdc23	ENSMUSG00000024370
Cdc25c	ENSMUSG00000044201
Fam53c	ENSMUSG00000034300
Kdm3b	ENSMUSG00000038773
Reep2	ENSMUSG00000038555
Egr1	ENSMUSG00000038418
Etf1	ENSMUSG00000024360
Hspa9	ENSMUSG00000024359

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA	MA0729.1	chr18:34943214-34943232	CAGTGACCTTCTCACCTT	-	6.73
RREB1	MA0073.1	chr18:34943592-34943612	TGTGTGTGTGTGTGGGGGGG	-	6.17
RREB1	MA0073.1	chr18:34943590-34943610	TGTGTGTGTGTGTGTGGGGG	-	6.95
ZNF740	MA0753.2	chr18:34943603-34943616	GTGGGGGGGGTGC	-	6.74

Enhancer Sequence

TAGTTCATTG TAGGTCCACA AAAGAAAACT AAATAATAAG GATCTTGCCT TGTAGCTCAG 60
GGTATCCTGG GGTTTTCAAA GCCCTTTCCT TAACTTGGCA AGTGCTGGAT GGGTATCAAG 120
TGTGCTCGAC TGTACCGTGT CTGCACTGCT TGTTTCAGTG TTGTGCAGCG AGCCCGTCCC 180
TGTCCCTGCC CCTGCAGTGA CCTTCTCACC TTCCTTATCA CACCATCACA GCTTCCCTTC 240
TGTGCTTGTG TGGGGTGGGG TGAGTTTGTT CTTGAGACAG TTACACTATG TAGTCTTGGC 300
TGGCCTGGAG CTGACCTGCT TCAGGCTACC TATGCCTGGC TAGGTTTTGC TTTTGTTTTT 360
AAAGTCAGAG CCTTGGCTGG CCTTGATCTG GTGTTACAGG TGTGTGGTAA AGCTAGATGT 420
TTGTTTATCA GGGGTTTGAG TCACTCACTC CTGCCTGCCT GGTACAAGTC TGTGCCCTGC 480
TAGCTGTTCT GCTGGTTTAG GTTTCCCTTC ACAAGTAGAC CCCAGGTGGG AGATAGGAAC 540
CCCTTTCTGT TGTTGATTTT AACAGTGGTG TGTGTGTGTG TGTGTGGGGG GGGTGCTGTA 600
GGCTTTGCTG CTTTAAGGTC AGAGCACCCT TATCTAACAC CTGTCGCTCC TCAGTTCCCA 660
CTGCCTCTGA TAGCGCGGTG ACAAACCCAT CATGCCTTCT GCCAAAGCAT CCTTTACTCT 720
TGTTCCCCAA ATGGGTGAAA CCTCCCTGGT TGTTTAGTAG TGACAAGTGG GGTGGCCTCT 780
TAGTTTTCCA GGAGTGTAAG 800