EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-07360

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr17:35323980-35325300

Target genes

Number: 28
Name	Ensembl ID

Ehmt2	ENSMUSG00000013787
Neu1	ENSMUSG00000007038
Hspa1b	ENSMUSG00000090877
Lsm2	ENSMUSG00000007050
Vars	ENSMUSG00000007029
Ng23	ENSMUSG00000036185
Msh5	ENSMUSG00000007035
Clic1	ENSMUSG00000007041
Ddah2	ENSMUSG00000007039
Ly6g6c	ENSMUSG00000092586
Ly6g6e	ENSMUSG00000013766
Ly6g6d	ENSMUSG00000073413
Abhd16a	ENSMUSG00000007036
Ly6g5b	ENSMUSG00000043807
Gpank1	ENSMUSG00000092417
Csnk2b	ENSMUSG00000024387
D17H6S53E	ENSMUSG00000043311
Apom	ENSMUSG00000024391
Bag6	ENSMUSG00000024392
Prrc2a	ENSMUSG00000024393
Aif1	ENSMUSG00000024397
Lst1	ENSMUSG00000073412
Ltb	ENSMUSG00000024399
Tnf	ENSMUSG00000024401
Lta	ENSMUSG00000024402
Atp6v1g2	ENSMUSG00000024403
Ddx39b	ENSMUSG00000019432
H2	ENSMUSG00000073411

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Mecom	MA0029.1	chr17:35324105-35324119	TTTTATCCTATCTT	-	6.12
ZNF740	MA0753.2	chr17:35324642-35324655	GAGGGGGGGGCGG	-	6.34

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_00589	chr17:35309410-35373028	pro-B_Cells
mSE_01352	chr17:35301415-35412021	Th_Cells
mSE_02033	chr17:35325152-35356853	Macrophage

Enhancer Sequence

AATCATCTGG AAGGAGTATC TCTGAGAGGG TTTTTTTTTT CCCCACCAAT TTCCCAACCT 60
CCTGGTTAAA TGTAAGTTTC CTAGCTTCCT ATATTTTTCC TGGGTCCCCC TTCCCCAATT 120
TTTTATTTTA TCCTATCTTC CTCTCCCCGA TCAATCCTGT TTTCTATTTT TTGACAATTT 180
CATACATATA TAAAAAGTCT CAGCCGGGCG TGGTGGCGCA CACCTTTAAT CCCAGCACTT 240
GGGAGGCAGA GGCAGGCGGA TTTCTGAGTT CGAGGCCAGC CTGGTCTACA AAGTGAGTTC 300
CAGGACAGCC AGGGCTATAC AGAGAAACCC TGTCTCGAAA AACAAAACAA AACAAAACAA 360
CAAAAAAAAA GTCTCTTGGT CATTTCCAAA GCCCTTTCTC CCTCTCCCCC CTCCCAACCC 420
ATGTCTCTCC CACCTTTCTG TCACTTTATG TTGAGAGTCT CATGTATCCT GGGAGGCCTT 480
AGATTCTCCT AGTAGCCGAG TATGCTTGAC TTTCTGATCC TCACACCCCT GTGTCGTGTC 540
TTAAGTGCTA GCTTGGCAAG AGTGTACTAC CATGGCTGTT TTATGTGGCT CTGGGGTCAA 600
AGCCAGGACC CTGCTATCCT CTCACAGTTT AAAATACAGG AAAATATACT CTAGGAGATT 660
TTGAGGGGGG GGCGGTGTTG TATTTTTGTA TTAGTTTTTG TTTGCTTGTT TTGTTTTGTT 720
TTTAAAGACA GGGTTTCTCT GTGGAGCTCT GGCTGTCCTG GAACTCTAGA CCAGGCTGGT 780
CTTGATCTCA CACACAGAGA TCCTCCTGCC TCTGTCCGCC ATCCCAACCC CTCCGGCCCT 840
CTTGCCCCCT CACTCCCACC TCCCCCCACT CTGGGATTAA AGGTGTGCAC CACCACTGCC 900
TGGCTTTTTT TTTTTTTCTT TCTTTCTGCA GTATCTTCTA TAGTTTAGGC TGCTTCCAAA 960
TTTCCTGAAG CCTCATGCAG AGACAAGTCA TGTCCTTGAT TTCTAGTCCT TCGGACCACC 1020
CCACCTCTCT GGTGCTGGGA TTACAGGAGA CACTATAACC CAGGGCTTCG TGCCTACACA 1080
TTCATTACCC AGACATATTT GTTACCCAGA CTTCAACTTC TCACTTCCTC TAGAGATTCA 1140
CCTACCGGGT TACCTCTCCT GACTATGCTC ACTCCCTACT GTTTCCGGGT CTCAGGAGGC 1200
CCCTCTTCCA CCTGTACTGC CTCATTCTGA CCACTTCTCC TAATCCTGAA CCCTGCTTTT 1260
CTTCCCTCAC TCTCCAGCCC TCACATCCCT CCCCTTTCCG AACGGAGGGG TCCCTACTTA 1320