EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-07178

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr17:28621760-28622890

Target genes

Number: 13
Name	Ensembl ID

Zfp523	ENSMUSG00000024220
Def6	ENSMUSG00000002257
Ppard	ENSMUSG00000002250
Rpl10a	ENSMUSG00000037805
Tead3	ENSMUSG00000002249
Fkbp5	ENSMUSG00000024222
4930511I11Rik	ENSMUSG00000024223
Clps	ENSMUSG00000024225
Srpk1	ENSMUSG00000004865
Mapk14	ENSMUSG00000053436
Mapk13	ENSMUSG00000004864
Brpf3	ENSMUSG00000063952
Stk38	ENSMUSG00000024006

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HINFP	MA0131.2	chr17:28622534-28622546	CCGCGGACGCGG	-	6.04
PAX1	MA0779.1	chr17:28622360-28622377	CGTCACGCTTGGCTGCA	+	8
PAX9	MA0781.1	chr17:28622360-28622377	CGTCACGCTTGGCTGCA	+	8.17
RREB1	MA0073.1	chr17:28621837-28621857	CCCCAAACCACCAGCTCCCA	+	8.03
ZNF263	MA0528.1	chr17:28622048-28622069	AGATGAGGAGGAGGAAGATGG	+	6.18
Zfx	MA0146.2	chr17:28622752-28622766	GGGGCCCAGGCCTC	+	6.42

Enhancer Sequence

GTGCCTATTC AACGCCCTGG TCCGCTGGAA AACACACTCC TGAAAGAAGA AGAAGGGAAA 60
AAAAAAAAAA AAAAAATCCC CAAACCACCA GCTCCCAACT GCCGCATGCA GAATTTACTG 120
AATGGCGGCC AAGCGCTGTA CACCCTGTCC CGAGCCCCGC CGAGGGCTGT CCCAAGTTCT 180
GCACGCTCTG CTTACGATCT GTACCTTCCA ACGCTTTCGC CATGGCTGCA GACACCAATT 240
ATTTAAAAAA TGAGGCGCAA GCGCTCCACC TGGCTCATCC ACAGACGAAG ATGAGGAGGA 300
GGAAGATGGT CATAATGCAA CGTGCTCCCT TAGATTCATC CCACACACAC ACACAAAATG 360
CTGGGTTTGG AGTCAAGGAC TATGGCCGGA ACAGGAGTGG TGATGCCGCT GGGGCGAAGG 420
GAATGAAGAT TCCTAAAATA ACTTTTATTT CCTTAGTATT ATTGAGAGCG GGGGTGAGAG 480
ATGAGAATGT GTATCGGAGC CAGTGGTGTT TGTGCTGTGT ACACAGGGAG GTCAGAGGAC 540
AACTCGCGGT TGGAGTCGGT TCCCCTACTA CCATGTCGGT TCCCGGGATC GAACCCAGGT 600
CGTCACGCTT GGCTGCAAGC GGCTGTACCC GCTCAGCCAC CTCCGAGACA ACTTTTAATT 660
AGCCCTTCCT CCTCAGTACC TCCGAGACCC TCCGGTCACC TGCCTGCCCG GTGCGAGCCG 720
GCTCGGGAGC GGCAGGTGAG GGCGGTGCCC GGCCGGCACG CCCATCGCGC GGCCCCGCGG 780
ACGCGGCGGA GCACTCCGTT ATCCGCGGGG CTTGCAGGGC TCCGGAAGGC CAAGTTTCCT 840
CCGCGTCCGG AGGGCGGCGT GGCGGAGCGA CACGGGGCTC CCCGGACCTG TGGGCTGCGC 900
GGGAAACAAA AGCCGCGCGC GGGCGAGCGA GCCGCCGCCG CCGCGCTGAG GGAGACGCTG 960
GAGAAGAGCG CCGGCCGCTC CACCTCCCAC GCGGGGCCCA GGCCTCCCGC GCGTCCCGTC 1020
CACGCCATCC CGGGGAAGCC GCGCGAGGGG CGGCAGAAGC GGGACCGCGA GCACGGGGCT 1080
GGCTCCGGGG TCCGCCGCGT GCGCGCGCCC CATTCCCGCG GCCATGGCGC 1130