EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-04772

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr13:104848980-104849250

Target genes

Number: 8
Name	Ensembl ID

Erbb2ip	ENSMUSG00000021709
Nln	ENSMUSG00000021710
Sgtb	ENSMUSG00000042743
2410002O22Rik	ENSMUSG00000021711
Trim23	ENSMUSG00000021712
Ppwd1	ENSMUSG00000021713
Cenpk	ENSMUSG00000021714
Adamts6	ENSMUSG00000046169

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr13:104849177-104849189	AAACAAACAAAC	-	6.32
Myod1	MA0499.1	chr13:104849097-104849110	AAGGACAGCTGCA	-	6.11
PAX6	MA0069.1	chr13:104848998-104849012	CTCACGCATCAGTT	+	6.09
REST	MA0138.2	chr13:104849088-104849109	TTCAGGCCCAAGGACAGCTGC	+	7.37

Enhancer Sequence

CCTGCAAAAA GCCATTTCCT CACGCATCAG TTTCCCACGC GTCACTGGCT TACTTAGCGT 60
GGGCACACTG CTTTCAGCAG CTGGAGGGAT GCGATGTGGT AACTGACGTT CAGGCCCAAG 120
GACAGCTGCA CCATCTTATT TGGACTGAGT CAGGATGGGG AGGCAGTGAT GGACCAGCTG 180
GCTCAGAAAA CAATTTGAAA CAAACAAACA AAAATGTTCC AGGGCACCTG TACAGATGGC 240
ATTTTAATGG AGAGGAGGCA AAATTAAGCC 270