EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-03715

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr12:77987080-77988620

Target genes

Number: 6
Name	Ensembl ID

Plekhg3	ENSMUSG00000052609
Spnb1	ENSMUSG00000021061
Churc1	ENSMUSG00000090258
Fntb	ENSMUSG00000033373
Rab15	ENSMUSG00000021062
Max	ENSMUSG00000059436

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr12:77987902-77987923	CAGGCGAAAGTGAAAGGGACT	-	6.1
Nkx2-5(var.2)	MA0503.1	chr12:77987433-77987444	AGCCACTCAAG	+	6.62

Enhancer Sequence

CGGGCTTGCC AGGAGGTGTC TAGGGTAGAA CTCTCCCTGA TCAGAAGGCT GTGATCTGGG 60
AGATGTAGGG AAGGAGAGAT GCTATAAATT GGTCCTTCCT GGAGTGGTCT TTCCTGTAAA 120
CTCTGGAAAG CCCTGTGCAA GTAAAGGCTC CCTCCATTTC ACCTGAAGCA AAAGTGCACC 180
CGATGCCAGG GCCCAGCAGC AAATCCTCTC AGAACAGGTT TGCCTTGTGA GGAAACTGGA 240
GCCTCTGTCG TTTAGCAGGA AAGAATCACG GAGGGAAATC TCTCCTCTGG TGTGAGTCAG 300
CAGTGCCCGA CTTAGTTACC TTCTCATCAC GGCGATAAAA TGCCCCCAAC AAAAGCCACT 360
CAAGCCCTTT CTGCTGTCTT TCCTTGATAC TGTAATGGTG CTCATGAATG TCCAGGCTGA 420
TGCTCTTAAA ATATCAACAA TACTGAAAAG AGAGGCAAAC ACCGGGTCTT TATCCGGCCG 480
CACTCCAAAG CCACTGTCTG GCTCCAGGCT GTGATGGGGA AGCAATCACC ACTGATCTCA 540
GATCTGGGAA AATCACTGTA AACTCACAAG CAGGTTCAAC AAGTGTGGGG CAACCAGCCC 600
AGATCTGATG TGCCAGTCAA AGACCTAGAA AATCGGCCAC ACAATCCTGT CAATTCAGTT 660
CCATTGTACT CGTCACCTCA GATGGCATCA TGGGCCATGA AGAAACAAGA CAAAAGCACA 720
CGGGGCCGGG ACATCCTGGG GTCCTTTTTC TAGGGTTGTT ATACGTATAA ATAAGATGCC 780
TGAGTGGCAA ACATAAAATG AATGAAGAAA AAAGGCAGCT TACAGGCGAA AGTGAAAGGG 840
ACTGTTTGGC AGGGAACACA TTGTGGCAGG AACAGGAAGC TGGCTTTACA TGTACACTCA 900
GAAAGAAGAG AGTGCACAGG AAGTAGGCCT TGTTCTAGGT CTACCCGAGT CCTAGCTTCC 960
TGTGAGGGTC TACTTCCTCA AACAGCAGCA GCAGCAGCAG ATGGGGACCA ATACCCAACT 1020
AAGCGAGCCT GCGGGTGTTG GCATCTCACA TTTGACCCCA GCAGTGCTGT CTTGAGCCTT 1080
CTGCTCTTTA TCCTCCCAAC AGTAGAGTGG GCTGCGCTCA AACCGGCTTC TTACTGGTGG 1140
TGGGAACAGA AGGGTGTTGG CGGAGAGGGC TCGGGTGAGA AAGTATGCTC ACTGCTGAGG 1200
TCTAGTAATG CATCTAGACC TGTGACTAGC ATGGAGAGCA GCAGTTGAGC CCTGAGCTAG 1260
AGGCAGAATC AAAAGGTCCT CAGAAGAGAC TGTACTGCTT CAGATCCAGG TGACAAGTTT 1320
ACTGAAACCT AAGAGAAAGG TTTGGTCAAG AAGCATGGGA CTCAGCACCA GGTCTACCAA 1380
AGATCTCCTC CCCACCTCAA GGTGTTTGCA ATCTGGCAAG ACAAATGCTT AAATAGAAAA 1440
CTCAGGAGTG TGCACAAAAC TGACAGGAGT GGGGTGAAGA GTTAAGTCTT TTGGGCGGTT 1500
GTAGTCAAGT GGCAAAGGGA TATTTTCACC CCTTTGAAGA 1540