EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-03114

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr11:106299840-106300640

Target genes

Number: 12
Name	Ensembl ID

Limd2	ENSMUSG00000040699
Strada	ENSMUSG00000069631
Ddx42	ENSMUSG00000020705
Psmc5	ENSMUSG00000020708
Smarcd2	ENSMUSG00000078619
Cd79b	ENSMUSG00000040592
2310007L24Rik	ENSMUSG00000009210
Icam2	ENSMUSG00000001029
Ern1	ENSMUSG00000020715
Tex2	ENSMUSG00000040548
Ddx5	ENSMUSG00000020719
Ccdc45	ENSMUSG00000018372

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr11:106299840-106299852	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr11:106299844-106299856	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr11:106299848-106299860	GTTTGTTTGTTT	+	6.32
NFYB	MA0502.1	chr11:106299948-106299963	CTGATTGGCTGGGAT	-	6.1

Enhancer Sequence

GTTTGTTTGT TTGTTTGTTT TGTTTTGTTT TTTGTTTTTT CCCTTCTCTG TTTACAGCAG 60
TAAACTCTGG CCAAATTCTT CTCCTGGGCA TAACGGAAGA CCAGGCTGCT GATTGGCTGG 120
GATGGACAGT GTGGAGAGGG CCTGAGTAGC AGGAGCAGGC TGCCACATCT GAAGACCTCA 180
GGGAAGAGGC TGCACAGTGA GGCAGCACTG CCAACAAATG CCCACAGCTA TAGAGCAGAA 240
GAGAGGAAAA CGTTTTAGCA AGATTTTGTA TGCAGAGTTC TAGACTCAGG AGGCTCATGG 300
TGACAGACTG CTGTCTGATC TTCTTGTCAC TTGGGACTCG CCTGTGAAGT AGTCTTTCAA 360
GCCTTATCAT ATACTGCCTG TGCTTACAAC AGAGACACAC ACCAGATGTG CTGTGCAGGT 420
AGCAAACAAA TTCACTAAAG CAAAGGACTC ACAGGAAACA GGGTGAACTT TCAGTCAGTA 480
AGCACATGTT TATCTTTCCC ATTAATCACC TCTCAGTACA CTCTCACAAA CAGACTGATG 540
CAAGAGACAG GAAATAAAGG CATACGACAC TCACTCAACT GAAATAAAGC AGGCAAGGTG 600
CAATTAGGGC CCAGCATCTC CAACTCAGCC TCAAAGCCAG GCAAGCCACA CAAGCCAGCA 660
AAAGCAAGAA TGTCAGACTC CAAAGAAAGC ACAACACTGT AAAAAGCCAT CTTTTTTGCT 720
CACTTCAGCC ACTTAATGGT GCCACAGGTA AAACAGAGGG CAGAGGTACT GCTAAAACCT 780
AGCAAATATA AAAATAAGAC 800