EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-03030

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr11:100792560-100793660

Target genes

Number: 26
Name	Ensembl ID

Nt5c3l	ENSMUSG00000017176
Acly	ENSMUSG00000020917
Cnp	ENSMUSG00000006782
Nkiras2	ENSMUSG00000017837
Dnajc7	ENSMUSG00000014195
Zfp385c	ENSMUSG00000014198
Dhx58	ENSMUSG00000017830
Kat2a	ENSMUSG00000020918
Hspb9	ENSMUSG00000017832
Rab5c	ENSMUSG00000019173
Hcrt	ENSMUSG00000045471
Ghdc	ENSMUSG00000017747
Stat5b	ENSMUSG00000020919
Stat5a	ENSMUSG00000004043
Stat3	ENSMUSG00000004040
Ptrf	ENSMUSG00000004044
Atp6v0a1	ENSMUSG00000019302
Naglu	ENSMUSG00000001751
Psmc3ip	ENSMUSG00000019303
Fam134c	ENSMUSG00000017802
Tubg1	ENSMUSG00000035198
Tubg2	ENSMUSG00000045007
Plekhh3	ENSMUSG00000035172
Ccr10	ENSMUSG00000044052
Vps25	ENSMUSG00000078656
Becn1	ENSMUSG00000035086

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr11:100793089-100793110	TTTCACTTTCTCTTTCTAGCT	+	6.34
IRF1	MA0050.2	chr11:100793083-100793104	TACAAGTTTCACTTTCTCTTT	+	7.99
POU4F1	MA0790.1	chr11:100792571-100792585	CATTAAATATTTAT	-	6.14
ZNF263	MA0528.1	chr11:100793520-100793541	TTCCCCTCTCCCGTCTCCTCC	-	6.97
ZNF263	MA0528.1	chr11:100793523-100793544	CCCTCTCCCGTCTCCTCCTTC	-	7.04

Enhancer Sequence

AGTCAGCTTT ACATTAAATA TTTATTGTGT CCAAACCACA AGTAGGAAAA ACTTCAAAGG 60
CTAACTATTT TAATGATAAC TCACATTGTT TGGCTTACGG GAAAGGTAAT TACACAGCTT 120
GCATTTGGGT TTTGAGGTTT TTAGGATTTT TGTGCGGGTG GGAGGGGGAG ACAAAGGAAC 180
AGTCTAATGC ATTTAGATTC TGCCAGGAAA AAAAAAAAGC GAGCTCTCTA AAAGCAAAAC 240
AAATTTAGCA TTAGATACAA TGTGGGGAAA CTTGCTAGTA AGCTTTCACC TAAGCAGGTG 300
CAGAGTCCAG ACTCAAAGCA CAGACTCTCA TACCGAGAAC AAGAGGTCGG GACACCGCAA 360
ACTAATAAAA TCAATCAGCC GTCGGGAAAG CAGATGGCTA CACAGACAGG CAGGGTTTTT 420
CTTTCCTAAT CCCAAGCAGT TTTCAGAAAT GGCATCTACA AAAACTACCC AAACATCCCC 480
GTAATAAACT GCGCCCCTCC TCCACAACAC GGAAGCCATT AGTTACAAGT TTCACTTTCT 540
CTTTCTAGCT CCGCTGGCTT CCTTCTGTTC CACATGGGCC CACTGGGTTG GACTGGTTGC 600
AGGTCCATTC CTGTCTTCTC CAACCCAAAC TTAAAGAGGT GAATAGTAAA TTTGACTCAT 660
GGGAGCTAGG TTGTTATCTG TGAGGCTATT CACTTGTTAG GTACAAAGAA AAGTTACAGA 720
ACAGGAAGAT AAAGCTGTAT ATACACATCA AGTGAAGGGT AACTGTGAAC ATCTGCACGT 780
CCATTCACGC CCTCACACAT GCTTGTATAC ACATACACAC ACACACACAC ACACACACAC 840
ACACACACAC AGATGTGAAG AGAGACGCTA TCAGCTGCAC AGGACACAGC AAAGCAACTT 900
CCAGCATCAT GTGGGTCATT CATGGATGTC ATCCAACGTC CAAGCCTTCT GGATCTCTTC 960
TTCCCCTCTC CCGTCTCCTC CTTCCTAAGA AAGATTCAAC CCTAACCACT CCTCTACCCT 1020
TCAACTGTCC AAGAGTATCT GTCCCTTATC TTTTTGCTAT GGTAGCACAC ACCTTTAATA 1080
CAAATACCAG GGAGGCAGAA 1100