EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-03016

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr11:100702900-100704080

Target genes

Number: 24
Name	Ensembl ID

Acly	ENSMUSG00000020917
Cnp	ENSMUSG00000006782
Nkiras2	ENSMUSG00000017837
Dnajc7	ENSMUSG00000014195
Zfp385c	ENSMUSG00000014198
Dhx58	ENSMUSG00000017830
Kat2a	ENSMUSG00000020918
Rab5c	ENSMUSG00000019173
Kcnh4	ENSMUSG00000035355
Hcrt	ENSMUSG00000045471
Ghdc	ENSMUSG00000017747
Stat5b	ENSMUSG00000020919
Stat5a	ENSMUSG00000004043
Stat3	ENSMUSG00000004040
Ptrf	ENSMUSG00000004044
Atp6v0a1	ENSMUSG00000019302
Naglu	ENSMUSG00000001751
Mlx	ENSMUSG00000017801
Psmc3ip	ENSMUSG00000019303
Fam134c	ENSMUSG00000017802
Tubg1	ENSMUSG00000035198
Tubg2	ENSMUSG00000045007
Cntnap1	ENSMUSG00000017167
Plekhh3	ENSMUSG00000035172

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxj3	MA0851.1	chr11:100703093-100703110	AAAAGATAAACAAAAAC	+	7
Foxq1	MA0040.1	chr11:100703116-100703127	AATAAACAATA	-	6.62
Nr5a2	MA0505.1	chr11:100704046-100704061	GAGTTCAAGGCCAGC	+	8.25

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_08710

chr11:100702163-100704264

Liver

Enhancer Sequence

AAATAATATT ATAATATAAA AATATAATTG GCTTGACTCT AAGAAAAGTA TGGTGGCTCG 60
CACCTGTGTA TCCCAGCTCT CGGAGCCCTG AGCCTCCTAC AAGCTGGGGG CTAGCCTGGG 120
CTAGCTTGGA GGCTAGCTTG GGCTGCATTG AGAATGTACA GTCAGCCTGG ACTACATGGT 180
GAGACCCTGA CTCAAAAGAT AAACAAAAAC CAACCAAATA AACAATAACC TTATTTCCAA 240
GAGCACGTAT TTAAAGAGGT GGCTACCCCG CATATATTTT GAGGGCTGAT GAAGTCCAAT 300
GCTTAGTAAT TTGTCAGACT AAGCGCCCCG AGCTCCCTTC GGCTGCAAGC ACTCGTACTA 360
AATCGTGCGA GTGTAATTTA TTTAAGACAG TTGGCTTACG TTGGACTTTT AAATTTTACA 420
CTTCCCCCAA ACCATGCCCT AGCATCCCTA GGCTTTGCAT CTTAGACATC ACGAATGAGT 480
TTTTACAACC TTTCTCATTT ACTCTCACCT AAAATCCTGG GAAACCCCCA CTGAAGGCTT 540
TACACACTCG CCAGCCACAG GGAGGGGAAC ACAGAGAGAG AACAGCTTTA GCGGTGGCTC 600
TCACTGCTGA GAGCATAAGG AAATTCTGAC TTACAGCCAT CGCACATTGA GCTTTTTCCA 660
CTGACAGTGT AGCTTTTGTC AACATTCAAA GAAAATTCAA CCCCTGATCA AAGGTGACAA 720
TCGCAGGTGC TGACATCCTG TCTGTTTGAA CAGGGATAGA CTTTCTGCCC AGGGAATTTG 780
GATTTTTTTT TTTTTCTCTC TGTCACTTGA GCTCTGGACT TTATGGCGCA TCATTTCGGG 840
GCTTGGGGAA CTTATAATGG CCTTTGCTTT GGTTTAAATA CATAGTAATT CATCAGATGG 900
CTCCGCAGTT AAGCGCACAC ACTGCTCTTG CGGAGGACCC TGGTTCAGTT CCCAGCACCC 960
GTGTGAGGTA GCTCCCAACT CCTGCCGCAG GGGTCCAACC CCTCTGACCT TGGCCCTAGA 1020
GCTCACCAGC ATATATTCCT ACATTAACAC ATATATACGT AAGGTTTGAA AAGTTACTCC 1080
GTGCCGGGCA GTGGTGGCGC ACGCCTTTAA TCCCAGCACT CGGGAGGCAG AGGCAGGCAG 1140
ATTTCTGAGT TCAAGGCCAG CCTGGTCTAC AGAGTGAGTT 1180