EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-02956

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr11:98387630-98389390

Target genes

Number: 16
Name	Ensembl ID

Med1	ENSMUSG00000018160
Ppp1r1b	ENSMUSG00000061718
Stard3	ENSMUSG00000018167
Pgap3	ENSMUSG00000038208
Erbb2	ENSMUSG00000062312
1810046J19Rik	ENSMUSG00000002580
Grb7	ENSMUSG00000019312
Ikzf3	ENSMUSG00000018168
Zpbp2	ENSMUSG00000017195
Ormdl3	ENSMUSG00000038150
Psmd3	ENSMUSG00000017221
Med24	ENSMUSG00000017210
Thra	ENSMUSG00000058756
Nr1d1	ENSMUSG00000020889
Msl1	ENSMUSG00000052915
Casc3	ENSMUSG00000078676

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SCRT1	MA0743.1	chr11:98387840-98387855	GAGCAACAGGTGCTC	+	6.76
SCRT2	MA0744.1	chr11:98387840-98387853	GAGCAACAGGTGC	+	6.71

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_12165

chr11:98387813-98388356

Spleen

Enhancer Sequence

GTCTGAAGAT AAATAGACTA TTTATATAGT TTCAAAATAC TTGTGAATTA GTTTGATTTA 60
TGTGTATGTG TCTGAGTTAG TGGATTCCAT GTGTGTGATC GGGGGTGCCA GGGGTGTCCA 120
GAAGAGGGTG TCTGATTCCT CGGAGCTGGA GTTATAGGTG ATGAGAAGCC ACTTAATATG 180
TGCTAAGAAC TGAACTCAGG TCCTCTGGAA GAGCAACAGG TGCTCTTAAG AGCTAAGCCA 240
TCTCTCCAGG TCCCCAGAGT ACTTCTTTTC AATGCTTAAA ACCATAGAAG TGAAAGAATA 300
GCTATATAGT GGCAAAGCCT GGTTGACACA AAGTCACATT TCATGTCCCT GAAGTCACAC 360
GTGAAGTCAC ACGTGATCAA CTATGGTGGA CACCCTAATT CTTACAGAGC AGGAGTCATG 420
CCATGAGGGA TCAACCTAAC TTGAGAGAGA GCTTACAAAG TAACTGGCTG ACAATCCTGG 480
GAAGTGCCAA AGTCGTGACA GCAAGAGGGA CTGTTCTAGA CTGCAAGTAG AGATGTGACG 540
GGGACCACGA GTGCTCTGGA CTAAATCCTC TCGTGGGAAA GAGTATTACA GACACAATCA 600
GAACACTGAT GGGGCAGGGG ATAAATTGGT AGTAATTTAC CAATGTTCAT TTCCTGGTTT 660
CGCTGGCTGT ACTGTGGTTT TATGCCTGAG ATAGGACCTA CACTTTAAAG AGCTCAAAGT 720
GATAAAAGTG ATACGGATCA ACTCAGCAAC TTATGCTCAC ATTTTCCGAA AAAAAAAAAA 780
GTACTTTTTG CACTATACTG CAACTTTTCT GTGAGTTTGA TAGTATTTTT TTCTTTAATT 840
GTAAAAGGGG GGCTGAGGGG GAAGCTGGCT GCAAAACTTT CAACTGTGCT GGGAGGATTC 900
TTAAAGGGAA CAAAGGAAAG GCAGTTCAAA GGCCTGCGAG CAACCGTCTT GTGGCAACAT 960
CTTTTAGTTA CATGCAACAA AGTCACTTTG GGTTTGGTTT GGTGGTCTAA AGGCAAAAAG 1020
TCCTGGTCCC GGGACCTTTT AAGCTCCCTG GCGATGACAT TTAAATTGGT GTCAACACTT 1080
TTCAGATAGC TTGTGTGTAC AACAGCAGCA AAGATAACTG GGTGCAGCTC TAAAAAGAAG 1140
AGGGAGGTTT CGACTGCCTT AGCACTAGTA ACTTCAGAGA AATTCAAACA GCCTATACTA 1200
GACCACAGAG AAGGTTTTCC CAGGTTAGTA GGCATAGATG CCCAAAGGCG TCCAGAAAAA 1260
AGGGTATTGG AGCCCCTGGA GTTGGAGCTC TAGGAGGATG TGAGCCATTC CGAGTAGGTG 1320
CTAGGAATCG AACTCTGGTC CACTGAGCCA TCTCCAGGTC TGATTGTAAT TTTCTCGTCT 1380
TAACATTTGC CTCCTAAGTA GCAAACTTTG CAGAGGTCAG CACTAATCTA TGATTGAGAC 1440
AGTGGATGAA TCCCCCGGGG TAACAACACT AAAGATGTTT CTCTTCTTGC TTCTCCCGGC 1500
AGTTTACTCT TGTTAGTGAT TTATGGCTAT ATTAGCAATT TCAGTTGTCT CTTTCCATGA 1560
GTACTGAAGA CAGGCCTCCA TTGCATTATG GAAGATGACA ATTTCATAAC ATGTTTCCCC 1620
TTCTATTTTA TTTTGGTAGG ATTGGGGATT GAACCCAGTG ACTCACATAT GCTAAACAAA 1680
TTCTCTACCC CTGTATACCC AGCCCTGAAG ATGACAGCTT CCATTTTTTT ATCCCTTTTG 1740
ATTATCTTTT CACTGCCAAA 1760