EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-02942

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr11:98053540-98054120

Target genes

Number: 12
Name	Ensembl ID

Plxdc1	ENSMUSG00000017417
Arl5c	ENSMUSG00000038352
Cacnb1	ENSMUSG00000020882
Fbxl20	ENSMUSG00000020883
Med1	ENSMUSG00000018160
Cdk12	ENSMUSG00000003119
Ppp1r1b	ENSMUSG00000061718
Pgap3	ENSMUSG00000038208
1810046J19Rik	ENSMUSG00000002580
Grb7	ENSMUSG00000019312
Ikzf3	ENSMUSG00000018168
Ormdl3	ENSMUSG00000038150

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr11:98054067-98054088	AACAAGTTTCAGTTTCCCTCT	+	6.28
IRF9	MA0653.1	chr11:98054071-98054086	AGTTTCAGTTTCCCT	-	6.22

Enhancer Sequence

GTCGAGATTC CTCATAAGAG AAAATGTGCT ATTTATCTTA ATATGGCTTA TTTTGAGTAT 60
CGTCCACTTT GCTACAAATG TCGAGACTTC ATTTTTGGAT AAGCCAGTCC AGGTCGTGGG 120
AGGGAGTATC TGAACCAAGA ATCAAACTCT TAGCTGGCCG AGAGGTGTGT AAGCCCGCAC 180
TTGGGAGGCT GAGGCAGGGG GACCTTGTCT CAAGAAACAA AGAAGATTCT ATCCCTTCCC 240
TTTTCTTCCC TCAACTGGGA AACTGGTTTG GGGATTGTTC CTGCCAGTTT ATAGTTCTGA 300
ACACCTCTCC CCCAAGCTTT AAAGCCACCG GTCGTGCACA ACTGAAAGCA GTTCGTAAAG 360
ACACAGCACA GTATTTGAAC ACTATGACCT TCCAAGTAAT AAACGGCCCG CTTTTACTAT 420
GATGAAGATC GAACCAAGCA AGTCACTCCG GCTAAAACAC CCTCCATTAC TTTGACATTA 480
CATTGTTCTA GTGTCATCTT CAGCGATCTC TCCTGGAACA AAGCATCAAC AAGTTTCAGT 540
TTCCCTCTCC TTGGGTCCCA CCGGGCTAAG CTCAAAGTAC 580