EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-02783

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr11:86641470-86642340

Target genes

Number: 9
Name	Ensembl ID

Rnft1	ENSMUSG00000020521
Rps6kb1	ENSMUSG00000020516
Tubd1	ENSMUSG00000020513
Vmp1	ENSMUSG00000018171
Ptrh2	ENSMUSG00000072582
Cltc	ENSMUSG00000047126
Dhx40	ENSMUSG00000018425
Gdpd1	ENSMUSG00000061666
1200011M11Rik	ENSMUSG00000020495

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GFI1	MA0038.2	chr11:86642221-86642233	TGCAGTGATTTT	-	6.11
RREB1	MA0073.1	chr11:86641774-86641794	CCCCCAAACACACCCCCAAC	+	6.91
RREB1	MA0073.1	chr11:86641776-86641796	CCCAAACACACCCCCAACCA	+	7.02
ZBTB18	MA0698.1	chr11:86641546-86641559	CCACATCTGGATT	-	6.52
ZNF263	MA0528.1	chr11:86641666-86641687	CCTCTCTCTTTCCCTTCCCCC	-	6.03

Enhancer Sequence

TGGTTTTTGA ACTTCTGGGC AGTTTTCCTT TCTCTGCTTC CCATCTTAGC ACGGGAGTAC 60
TGGGTTATAG ATAGCACCAC ATCTGGATTT TTATGTGGGT TCCAGAGGTT GAACTCTAGC 120
CATCAGGTTT TTGTATCCGT TGCTTTTCTG GCTGAGCCAT CTCCTAGGCT CCTCACCTAC 180
TTCTACTCTT ATTCTCCCTC TCTCTTTCCC TTCCCCCACC TTTTTCTTGT TTTGAAACAG 240
GGTCTCAGGT AGCCCAGGCT GGCCTAAACA TCACTGTGAA CTGAAGGGTC ACTCTTACCC 300
CTCCCCCCCA AACACACCCC CAACCAGAGC CTGAGATTAC AAGCTCATAC CACACCACAC 360
CTAGTTTCCA ACTTCTTTCC TTCGAGTATC TCATTGTGTA GCCCAGGCTG GCCTCGAATT 420
CAAGCTCCTT CTGCCTCAGT CTTCTGAGTC CTGGGGTGAC CAGTGTGCCC ACTACACACA 480
GTCTCAAAAC TCGAGACTGC AGCACCGTGT CTGTGAACTT CTTTTTCTAA GCTTTGTTCG 540
TGACAATGTT TGGAAAGAAT TCAAGTATGT GTTTCCAGGG GCAAGTCATC TTAACACACT 600
GTGGGGGTAG GCTGCATCCT GTAACCCGGC AGAGTGAAGT AGGTTTTTAT CACCAGGCAC 660
TTAAAAGAAT GCCACAATAA GAATGCTTAA CTGATGTTAA CACATCCGGC TTTTGGGCTG 720
TGATGTTCAA AGCCACTCAC GTTAGATCCT TTGCAGTGAT TTTTACTTTG TCCAGAAGCT 780
TTGAAGGTCC TTTTGTGTCT GGCATTGTGA AGCTCCTAAA ACAGGGGACT TTGTTATCTT 840
TATTCCAAAT TCTGAGTGCC TTTCCTTCTG 870