EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-01619

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr10:79712230-79714290

Target genes

Number: 27
Name	Ensembl ID

Bsg	ENSMUSG00000023175
Ptbp1	ENSMUSG00000006498
C030046I01Rik	ENSMUSG00000035781
Arid3a	ENSMUSG00000019564
Grin3b	ENSMUSG00000035745
ORF61	ENSMUSG00000013858
Cnn2	ENSMUSG00000004665
Abca7	ENSMUSG00000035722
Hmha1	ENSMUSG00000035697
Gpx4	ENSMUSG00000075706
Sbno2	ENSMUSG00000035673
Stk11	ENSMUSG00000003068
Atp5d	ENSMUSG00000003072
Midn	ENSMUSG00000035621
Cirbp	ENSMUSG00000045193
1600002K03Rik	ENSMUSG00000035595
Efna2	ENSMUSG00000003070
Mum1	ENSMUSG00000020156
Ndufs7	ENSMUSG00000020153
Gamt	ENSMUSG00000020150
Dazap1	ENSMUSG00000069565
Rps15	ENSMUSG00000063457
Apc2	ENSMUSG00000020135
2310011J03Rik	ENSMUSG00000020133
Mbd3	ENSMUSG00000035478
Uqcr11	ENSMUSG00000020163
Tcf3	ENSMUSG00000020167

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr10:79713770-79713785	TGAGGTCAGAGTTCA	+	6.47
RXRB	MA0855.1	chr10:79713771-79713785	GAGGTCAGAGTTCA	+	6.02
RXRG	MA0856.1	chr10:79713771-79713785	GAGGTCAGAGTTCA	+	6.3
Rxra	MA0512.2	chr10:79713771-79713785	GAGGTCAGAGTTCA	+	6.1
TCF3	MA0522.2	chr10:79713830-79713840	AACACCTGCT	+	6.02
ZNF263	MA0528.1	chr10:79714180-79714201	CCCCTCCCACTTTCTTCCTCC	-	6.26

Enhancer Sequence

TGGCGGGTGA GTGAAGCCCT TGCGGTCGGG AGAGTGGCGT AGTCCTGGGC TCCGAGCTGG 60
CGCTGCGGGG ACCTTGGAGC CCAAGCCTAG TGTTGAGAGG CGTTGGGACC GTAGAGACCT 120
ATAGGTCAGA TCCCAGCCCT CGGTAATGTC GGTGTCTAGC ATTAGGCCGA AGCATGTTTG 180
AATTCACGTT ACACAGTTCT GCATGGTCTA CATAGCAAGT TGCAGGCCTC CTGCTATCGT 240
CCCTGATTAT AGTCGGGAAC GCTGAGGCCT GTGTATCTTC CAACCTCAGG AAGCTGACTG 300
CAGAAACCCG GCTGATGTCC CCGAAGCACA GAGTGGGACA GGGGAGAGGC CCAGGACACT 360
TAGGCCACCC ACCCGGTGGC TCTTTCCATC TCATCCCCAA CCTGGACAGC TAGCAAGGGC 420
CTCTAGAGCA GATGTCTTAG TTTCCCTGCC AAAGCTTTGG TGTCTTTCTC TTTATGTACA 480
GGGATTAAAC ACCTGTGCAG TTTGGTAGAC GTGAGCGACA GTTGCTAAGT GGAACCTCCC 540
ATCGCCTAGC AGGTTGCAGT GTTAACATAA GGAGTGGGAG AACTCAGGAA GTCGGGTCTA 600
ACTCCTTCTG TGTTTTGTTG TTGCTTTGAG ACAGTGTCTG ATGGGTCCTA GCTCAAACTC 660
TATACTGTGG GTGATCTTGA AGGCTTCATC CGAATGCCTT CACTGCTAAT GCTGGGATGG 720
CAGGTGTGCA CAGTCAAGCC CATTTATACA GCACCAGGGA TGGAACTAAG AGCTTGGTGC 780
ATGCCAGGCA GGGACTCTGC CAACACAACT CCAGCCCCAA ATGCCTGCTT TGGAGACAGG 840
ATCTCATGTA TAAGAGGCTG ACTTTGAACT CCTGATCCTC CAGGCTCTGA CCCCAAATAC 900
TAGGATGACA GACTTACTAC TATACCCAAC ATTATTTTTT CTTTTAAAGA TAGGGTCTTC 960
CTGTGTGGCC TAGAGTCATA TCAAACTCAT GTTCCTGCTA CAGTCTCTCA TTGCTGGGGT 1020
TACAGACCCC ACCACTGTAC CCAGCCCAGC TGTGATGTAG CCCCCTTGAA GAGTGGAGGG 1080
CTTGGTGATT CGTGGTGTTG ACTGCTGGCG CCTGAATTCA CTCAGGCTCA GCTGTGATCT 1140
TGCTGGTGAC AGTTAATAGA CCTTACTGTG GTCCTATTTG AAGGAGAAAC TAACACCTTA 1200
GAGACAACAA GGAGGATGTT TGCTGTAAGG CATTGTACTG TACAGCTGTG ATCCCATCCC 1260
TTGGGACGCT GAGGCAGGAT GAGCCTAGCC TGGGCTATAC TGGATCCCTG CTTCAAAAGA 1320
AGGGCACTAA GATTTCTGGG AGTTCCAGGC CGGCCATGGA TACATAGTAA TACCATTTTA 1380
AAAGGCAGGA AGAGGAGGAG GCCTGGAGAT GTGGTCCAGT GTTAAAACAT TCACTGAATG 1440
TGTTCAGGGC CCCACATTTC ATTCCCAGCA TGACAGCACA GAAATCTGGT CTGAGCCAGA 1500
CTTGTGCTTC ATGCAGTCCT AGCTGCTCAG AAGGCTCTCC TGAGGTCAGA GTTCAGAAGC 1560
AGCTTAGGCA ACACAAAGAG ACCCTATGCC AGTTAAAACA AACACCTGCT GCTGGCACCT 1620
CCAGCCACTT AGTAGGGCAT TTACTTTGCT GAAAGTTTAT CCAAAGCCTT AAGTTTTTAG 1680
ATGGGGAAGA TCAGGCCTGG TGTGTGCCAC TCAGTCAGAA AGTCTAGAGT CTGCAGTAGT 1740
CTGTCTTTGG TCTAAGCAGT CGTGACCTTG GGAAGCAGTA GCCCTGAGCA AGGCTGAAGT 1800
CAGTGAGGAG GGCTGAGGCA GAAGAAGGAG TGTGGAAAGC CACCGTCAGC CCAGCCCCGA 1860
GTGTGGGAGG CAGGATAATC CCCATGTCAT GGTGGGTGTC TCTCTCCCAG TCCCACCTTT 1920
CTGTCATGGA GGGGCAGTCC CAGATGAGAC CCCCTCCCAC TTTCTTCCTC CAAGACAGGA 1980
TCTTGCTATG TAATTCTAGC TGACTGGAAC TTGGTATGTA GACCAGGCTA GCTCGAACTC 2040
ACAGAGCTCC CTCCACCTTC 2060