EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-01020

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr1:189200230-189203530

Target genes

Number: 2
Name	Ensembl ID

Gpatch2	ENSMUSG00000039210
Esrrg	ENSMUSG00000026610

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BHLHE40	MA0464.2	chr1:189201374-189201384	GTCACGTGAT	-	6.02
IRF9	MA0653.1	chr1:189201174-189201189	ACCGAAACCGAATCC	+	6.37
KLF4	MA0039.3	chr1:189202216-189202227	GGAGGGTGTGG	-	6.32
MITF	MA0620.2	chr1:189201370-189201388	GTGGGTCACGTGATCAAA	+	6.26
MITF	MA0620.2	chr1:189201370-189201388	GTGGGTCACGTGATCAAA	-	6.26
Nr5a2	MA0505.1	chr1:189203361-189203376	GCTGGCCTTGAACTC	-	8.25
SREBF2(var.2)	MA0828.1	chr1:189201374-189201384	GTCACGTGAT	-	6.02
Srebf1(var.2)	MA0829.1	chr1:189201374-189201384	GTCACGTGAT	-	6.02
TFEB	MA0692.1	chr1:189201374-189201384	GTCACGTGAT	-	6.02
USF2	MA0526.2	chr1:189201370-189201386	GTGGGTCACGTGATCA	+	6.88

Enhancer Sequence

TGAGGACCGT TTTCAAATGA CCTTAGTTGA AAGCCAAGTA CAGACTGATT TCATCTTAAG 60
CAGTGAGCGC CAGGTTCACG CTTGGTCCTC TTTGCTTCCA CACCTACCTG CCGTTCCCCA 120
GTAAGCGCTT GGTTCTGTCT CGGACTAGAC AACGAAGCAA CAAGTCCCCG AGTAACTGGT 180
GAATGGCTAG AATGGTATGC CAGCTAGACC TGGCTTGGCC TCTACAGCCC TTGTAGCCTA 240
CAGCTTCCTA ACAGCGGTTA GTGTAGTGAG CACCAGACTT TTATTTCAAT TCTGTACCCC 300
TGGCAGGGCC CTCCAGTGCC GCTGTATCAG TGAGTCAGAG TTACAACAAA ACCTGGTATT 360
TTTGATCATC TGATTGAACT TTAAATGATG TTTTTCCTTT GGGATCTTTC ACTAAATTTA 420
AACATTTAAA GGGAGCCAGC AAGGTAGTTC CATGGGTAAA CTCACTTGCT GCCAAACCTG 480
AGAGATCAGA CTTCAATCCC TAGGACCCAC AGGGTAAAGG AAAAGGTTAT CCTGAAGGTT 540
ATCTGAAGGT TATCCTCTGA CCTCTGCATG CCTACACACG TACCCCACTG CCCTTCATTC 600
ACAAGTAAAC CATTTCTACC ACTACAGGAG TTACCTTTTC CACTGCTGTC CCCAAATATC 660
TGACAAAACA CTCTAAAGAA GGAAGGGATT ATCTGACTAG TGGTGTGAGG CTAGAGTCCA 720
ATAAAGCCAG TGGGTGGAGC ATGAGCTAGG TGGCTGTCAT CATGGGCCCG CAGACAGGAA 780
GCACAGACAA GTGCTGGTCC TCAGCTTGTT TTCTGCTTTC GGTGTAGTCT AGGATCCCAG 840
CCCACGAAAC CGTGTCACCT ACTGTTAGAC TGGATATTCC CCTGTCAGCT CAACCTCACT 900
CATAACACCC TCACAGACAT TCCCAGAGGC CAGTTTACAC ACTGACCGAA ACCGAATCCA 960
CTTCAGCCTG AAGATTAGCT ACACCTAGAA AGCCAGAGAT CTTAACAGCT AACGTGCTTT 1020
CTGCTCATTG CTCTAAAAAG AAAGAGAGTG TTTGTCATCA GGTTTGATCA TGCACAAAGT 1080
GAAAACTACC CACCCTCTTT CCTACCACCT CCTCCGGGCT CACACCAGCT GCTGTGCTCT 1140
GTGGGTCACG TGATCAAAGG GCCTTGGGGG GAGATGCATG GCCCTGCAAG AATAGAAGCA 1200
CATTTCATAG CTTCCTTATG TTCTTCCTGC GGCAAATAAC AACTCAAGGG CTACCTGCTA 1260
TGCATCTCAA ACTATAGAAA TGATCACTAA ACGTCTAGGC TATGAATATT CAACCTAAAA 1320
GAAAGAAAGA AACAGAGAGA CAGACAGACA GGTAAATTTA AACACGGGGC AGTCCTAAGA 1380
ACCATGTAGT AATGTATTGG GCTTCCTACG CCCCACCCTA TCTTGAGACC ACCCCAATCT 1440
ACTTCCAAAT GTTGGCATGT TGCTCATGGT GGGTTTTCTC TGCTGACCAC CTTCACTCAT 1500
GACTGGTTAC AGGCTGTGTG TCCAGTCATG GGATCTCCAA ATCTCCATTG ATTTCCAAAT 1560
GCACACATGC CTCCTACCAG GAAAGAGGCG CATCGAAGAG GTATTCAGGA GCCCCCGTGA 1620
TTATTGGATC TCCCTTCTCT GCCAGACTGT CTTCTTCCAA GCCACTCCCT GCCCAGCCTC 1680
GCTCCTTCAG CGCCCTCTTT CCTGTTCCTA GCTGCTCAGA GACAGAAAGG GAGAGCGGAA 1740
TTATTTATTG TGCGTCTGTT TGAAGTGAAA GGCTTTTACA TTTTAATGAG CACTAAATAG 1800
GTGCGAGGAA ATATTGTTCA TTAGCTGTAA TCTGCGGAAT TGCTTGAGTG AACTTCCTTT 1860
GGAGGCTGCT TTAAGCGGCT CACTCAAGTA GAGCAGTTTG TATGGTAATT AAGGGAGCAT 1920
TTTTCTGTCA ACATCTGTGC TGCTATTTAT AACAGGGGAG GTGGCTTGCG GCTCCACTGG 1980
AGGGCTGGAG GGTGTGGGTG CTGAGAGATG CAGGTGGGAT GGGGTGGCAG TCAATGGCTG 2040
CACAGCCAAG GCTCGCAGCC ATGACAGGCT GGCAGCCATG ACAGGCTCGC AGCCATGACA 2100
GGCTCCTTTC TCTGCCTTTC CTCCCATTCA GCCCCAACTA ATTCTCAAAG AAATCCATCC 2160
ACATTCATCG TAGCTACAAG AATTCTTGCT CTGACATCTC TTCATTAATC ACAACCCCCA 2220
CCTGGCAGCC CAGGCAGGGA GATTCAAGAG GCTGTGGAGA AGCAAGCGCT CTTCAGCTTT 2280
GTCAGGTTTT TTTTTTTTTT TCCTGTCTCT TGTGAATTTT TCCTCTATGT CACCCTGATG 2340
GGACAGCAAG ATACCAGAAT TTGAGCAGTG GCACTTGGGG GCAGCCAGAG ATGACCAGGA 2400
AAGAAACACT GAACTGGGCA CCTCCCATCC CTGCTCAGGC TAGGGAATAG ACATCTTTTC 2460
TTATCACAAT TTGAGAGTCC TAGCATGGCC TACAACAAGC ATGACTCCAT GACCTTCTGA 2520
GGTGGCCTGA AGGAGTCTTT ATATAGTCTT TGCAATACCA GAATGACACG GCCTGCATAC 2580
CCTCCAACTA GAGCTGAAGA GCTTACCTGG ATAGACCCAG AAGACAGACT TGTGAGGGCA 2640
GAGACCAGTC AGCAGGAGGG TGGCCTGGCA ATGCTGACGC TCGGAGCAGG ATAATACAGG 2700
CAGGCACTGA ATGAGCAGAG GCCAGGAGCC TGCAAAGGAA GCTGATGACA AGACTGTTGG 2760
GCCCCATCTT CCAGAGGCAA GGAGTTCGAA ATGCAGTGGC TAAGTGCTGC CTCTACTCCT 2820
CTGGAAAAAC AAAAGCAAAC AAAAAACAAA ACAACTGGAC CTATCTTTTT AAATGTTCTC 2880
CAGCTTATGA TAGAGTCAGG CAGGATTTTT GAGGAGAGCA TCCACTTTGC CTGGCTGTGA 2940
AAGTGCAGCC GTGGAGGGAC AGGAGCCAAG CGTATCTGGC CCCTGGAAGA CACTGAAGGC 3000
CTGATCGCCA GGCTGGGGAT CTCCCTCTGG AGGAGCCTCT CTGTGTGGGC TCCATGCCCT 3060
CTTCTCTCTT CTTCCCTTTC CTCAGTCATC CTTCTCTTCT GTCTTTTGAG ACAGGGTCCT 3120
CTGTAGTCCA GGCTGGCCTT GAACTCTCTA TGTTACAGAG GGTGACTCTC CCCCTGTGGG 3180
TAGGCTTCCT CTGCCCCTCC CTGCTGTATT CATAGCTGCA TACCACCACA CCTGTTTGAT 3240
GCCATGCTGG GGATCAAGCC CTGGGCTCCA TGCGTCTAAG AGAAGCACAC TAGACCCTGA 3300