EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-00902

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr1:173701050-173702270

Target genes

Number: 8
Name	Ensembl ID

Ly9	ENSMUSG00000004707
Slamf7	ENSMUSG00000038179
Cd48	ENSMUSG00000015355
Slamf1	ENSMUSG00000015316
Cd84	ENSMUSG00000038147
Slamf6	ENSMUSG00000015314
Vangl2	ENSMUSG00000026556
Copa	ENSMUSG00000026553

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:173701523-173701535	GTTTGTTTGTTT	+	6.32
JUND(var.2)	MA0492.1	chr1:173701377-173701392	AATTACGTCATCTTT	-	6
NR2F1	MA0017.2	chr1:173701361-173701374	CAGAGGTCATGGG	+	6.22

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01188

chr1:173691802-173723197

Th_Cells

Enhancer Sequence

GCCAAACATA AGGTCCTGAG GTAGAAACCC CACTTTGTCA AAGGCTTAGC TAAATCCTGA 60
ACGTATCAGG CCACTGTTCA CCTGCCCATA TGAGTCACTC CACCATCAAA GCAGAAATAC 120
TCGTGAAGGA AAGTGAGTTG GTGTGAGGTA TAGAAATGTT CCTGCCCAGT CTCTTCTAGT 180
AAACAGGGCT ACACTGAATC ACAGGCTCGC TGGAAAACCC TCATCAGGCA GGAGGATGTT 240
TCAGGAAAAG AGACTCCACT TGAAGGCTTT TACAGCCCCG CATGTGTTTC CATTTGAGCA 300
CCCTCCAGAC TCAGAGGTCA TGGGAGCAAT TACGTCATCT TTCTTCTCAT GTGTTTGGGT 360
GTTGGGGTCT CCTTCTGGTG GAACTTTGAC TCCAGTCCTT ATGTGTGGAC TGTCTTCATC 420
TACCCCATCG GTTTCCTTTC ATCCTTTCTC CTCTCGACTT CTATCATTTG TCTGTTTGTT 480
TGTTTGGCTA CTTCCTACCC TACCTTTCTC TTCCTTGTAC CAGTTCTGTA CTCTGAAAGT 540
ACAAAAACAA ACAACAGCAG CAACAACAAC AACAACAAGC CTGCAGTGTC TGGTGACAGG 600
AAAAGGTGTG GGAGACGTGT AGGAGAGTGA AAAAGAGTTA ACAGTCTTAG AAAGGGTTAA 660
TGTCCCCATT TCCCCCTTCT TCTTCATATC AAAATTAGTT TAAAATGTCA ACAGTGTGAG 720
AGTGATTCTG TTTTTAAATG TTCAGCTCTC TTTGAGAAAT GGTGTTTATG GAAGTGATCC 780
CCGAGTTGTA TGTTCAGGGG TCCATGGGTG GCTCTCAGTC TTCCCTGTTT CTTTTACATA 840
GAGAAACTTG GGTTCAGGAC CCAAGAGACC AAACTGTATC TTGGGCACAT TGTTACAATT 900
CGGGTGTAAA GCCATCAGAG GAGGTGTGTC GTCTGGAACT GTCAGGCATT TCTGAGTGTG 960
GCTGGAAAAG AAAGGCCCAG TGTTCTTCCC AGGGTACCAC TGGGAAAATT GCAACAGACA 1020
ACCACAGGAA AACCAAGCGT TGCCACCTTA ACCGAGAACC GGCTGAGCAC TGTGTTTTCA 1080
GGGAAAATAT TAGCAACGCC CCAAAGACCT AGTTCTTTAA CACCTACCAT GCTTTCCTGT 1140
AACAGCCAAG CACCAATGAG TACAGTCAAG TACTCATCTT GACTGTAGCC GGTGTAGAAA 1200
GCATTTTTCC CCAAATCACT 1220