EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-00897

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr1:173260220-173260580

Target genes

Number: 18
Name	Ensembl ID

Sdhc	ENSMUSG00000058076
Pcp4l1	ENSMUSG00000038370
Tomm40l	ENSMUSG00000005674
Apoa2	ENSMUSG00000005681
Ndufs2	ENSMUSG00000013593
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Klhdc9	ENSMUSG00000045259
Pvrl4	ENSMUSG00000006411
Arhgap30	ENSMUSG00000048865
Usf1	ENSMUSG00000026641
Tstd1	ENSMUSG00000091166
F11r	ENSMUSG00000038235

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:173260321-173260339	GGAAGGGGGGAAGATAGG	+	6.19
EWSR1-FLI1	MA0149.1	chr1:173260317-173260335	GAAAGGAAGGGGGGAAGA	+	6.22

Enhancer Sequence

TGGGGTGGAA GAGGAGAAGA GAAGCGGGGC TTGGCGGATG GAGAGAGTGG CGATGTGCCG 60
GGGTAACGTA GAAAGTGAGA GACCCGGAGG AAAGTTTGAA AGGAAGGGGG GAAGATAGGG 120
CAGTGGAGCT GCACGGGTGA TAGAGGGTTT GGGGGTTTCC CTTTCCCCCC TGTGGAAGGG 180
CAGCAGAGTT AAGCAGTATC AGTTGCAGCC AATTTTAATT GCCAGGCGCT TAGCTTTTAA 240
TAGGGTGGGA AGGGCAGAAA GGAATGGTCA TGTGGGTTTG GAGAATTGGG GTTGAATGAG 300
GGTTCAACCG GATTTGCTTT CCAAAACACC CGCTTGCTTC CTTGTTTTTC CTGGTTACAA 360