EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-00888

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr1:172968160-172968790

Target genes

Number: 8
Name	Ensembl ID

Dusp12	ENSMUSG00000026659
Fcrla	ENSMUSG00000038421
Fcgr2b	ENSMUSG00000026656
Fcgr4	ENSMUSG00000059089
Fcgr3	ENSMUSG00000059498
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Ndufs2	ENSMUSG00000013593

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr1:172968578-172968589	AGAGATAAGAA	-	6.32
Gata1	MA0035.3	chr1:172968578-172968589	AGAGATAAGAA	-	6.32
Gata4	MA0482.1	chr1:172968577-172968588	AAGAGATAAGA	-	6.02
SPIB	MA0081.2	chr1:172968566-172968578	GATGCGGAAGTA	+	6.14

Enhancer Sequence

CTTGGAAGGC AGCTATGCTC ACCACTATAC CACCAACGCA GCACGGCGAC CGCTTTCGTT 60
TCGTCTCTTT AATAGAAGGA AGAAATTTAC TGAGCATGTT TGTATCTGTT TTCCGCAAAT 120
TTAAAAATGG ATTCCGTGAG AAAATTCGGC GTCAACCCAG AAGGAAATAT TTCCTCCGCT 180
TCTCGCCCTG TTCACCGCCT GACGTTCTCG GTTCCAGGCT CCGCAAACGC TCAGCGCCTC 240
CAGGCAGCTC CCAAAGTCCA CCCGGCACCG GTTCCATAAG CGACTTAGAA CGACCGGTGG 300
GGAGGAGAAC TGGTCGCTAA GAGATCATCT GCGGCCTGAC TCGGCCCCTC TGATAAAAAG 360
AAAACCGAAA GGTCCCAGAA GAGATGGATG ATGGAAGGTT TAAAGAGATG CGGAAGTAAG 420
AGATAAGAAA GATCTGTCCG CTACTTTCAC TTGTTTTGCT TTGCAAAAAC GTTCCCGGAG 480
AGTTCGTGTT TCTTTTTATC TGGAGAAATC ACAGATGGCG GCGTCATCGC CATTTAAGGG 540
TATTAAAGCC CTTATAAAAA TGTATGAAAG CCACACTACC ATGTGTCAGG ATGGCCGAGC 600
GGTCTAAGGC GCTGCGTTCA GGTCGCAGTC 630