EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-00762

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr1:155580010-155581140

Target genes

Number: 4
Name	Ensembl ID

Rgs8	ENSMUSG00000042671
Rgs16	ENSMUSG00000026475
Rnasel	ENSMUSG00000066800
Glul	ENSMUSG00000026473

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myog	MA0500.1	chr1:155580568-155580579	GACAGCTGCTG	+	6.14
SREBF2	MA0596.1	chr1:155581070-155581080	ATCACCCCAT	-	6.02
Tcf12	MA0521.1	chr1:155580568-155580579	GACAGCTGCTG	+	6.02
ZIC1	MA0696.1	chr1:155580521-155580535	GGCCCCCTGCCGTG	+	6.14
ZIC3	MA0697.1	chr1:155580521-155580536	GGCCCCCTGCCGTGC	+	6.11
ZIC4	MA0751.1	chr1:155580521-155580536	GGCCCCCTGCCGTGC	+	6.23

Enhancer Sequence

TACTGCAGGA ATCTTCTTGG AGCTCGGCCC AAGAACTAAC TTTCTGGAAC AGTAAGACAC 60
GGGGCCTGGG CAGTCTGCAG AGTGGATCAC TGACTGAGAT GGTACTGCAA TTAGACAGCC 120
TGGGATCAGA GCTTGGTCCT TCTGTCTGTT CCTCAATTAA CCTCTCCGTG CCTCAGTTTC 180
CCCGACCTGA AAACCACAAT CCCCGTGCCT CCTTCAGAGG CTGGGGGAGG GTTCGGTGCG 240
ACTATGAGAA GCGGGGCATG GAGAACTCAG ATGTACCGTT CACTAAACGC TCACAGTCAC 300
CATTATTAAC ACTGTAGCCA GGCAGTTGAA GAAGCCTGGG GATTTGGATC CAGAAGGTTC 360
CCTGGTGGCC TTGGAGCAGC TGAGCCAGCT GCTTGCTGGT GGGTGGGGAG GAGAGGCTCA 420
GTCACACAGC TCCCCGCGTG TCATGTCGCC CCTGCTCAGA TGTGTGGGGC CCATTATGGA 480
AAGCTCATTT CTTTCTCTGC AAAACATCAT GGGCCCCCTG CCGTGCTCCT CCCTCTGTCC 540
ACCTGGGCCT GTTTCTGGGA CAGCTGCTGT GTCAGGGGCG GATGGCCTGG GAGCTGGTGA 600
AAGGCCCACC TGTTCCTGTG GCTCACTCCC GCCCTCCCCC TCCCCGGCTG CCAGACCCAG 660
CCTCCCGGCT GCTCACACAT CAATCCACGT TTTTGAATCC CTCTGCTCAG GTGTTGTGGG 720
CGCATTGAGA GAGGCACGTT TGCTTACAGC TGGTCGCAGC ATCATGACCA GCACAGGGGC 780
TGTGTGGGGA GTCTCTGCTT TCCTGTGAAA CCTGTGCCAC CGTGTGCCAG CCCTCCTCAT 840
CCCTCATCCC ACTTTCCCTG TCAGGGGAGT GATGGCTCCA ACATGGAGGG GGTGTCGTAC 900
AAGGGTCCCT GGCTCTCAGG GCAAGGGTCC CTGACTCTCA GGGCATGGCC CTCCAGTGCC 960
TCTTGCATTA TGTCTGAAGA TGCCATTGAT AATCATGCTG GCGCTTGCTG TTCTCCTGCC 1020
CCAGCCGTGG CTTAGGAGAG CTTCAGGATA GTGTGGAGAC ATCACCCCAT GATCAGGACA 1080
CACCCAGGGC CTCGCCCCAA GCTGTTCTGA GGTCAGCATT GAGTAGTTCT 1130