EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-00464

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr1:90370910-90373720

Target genes

Number: 3
Name	Ensembl ID

Hjurp	ENSMUSG00000044783
Spp2	ENSMUSG00000026295
Arl4c	ENSMUSG00000049866

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CREB1	MA0018.3	chr1:90371609-90371621	TATGACGTCACC	+	6.02
CREB1	MA0018.3	chr1:90371609-90371621	TATGACGTCACC	-	6.02
Creb5	MA0840.1	chr1:90371609-90371621	TATGACGTCACC	+	6.18
ESR2	MA0258.2	chr1:90372047-90372062	GGGTCACCCAGACCC	+	6.34
FOSL2	MA0478.1	chr1:90371303-90371314	GGATGACTCAG	+	6.32
JDP2(var.2)	MA0656.1	chr1:90371609-90371621	TATGACGTCACC	+	6.14
JUNB	MA0490.1	chr1:90371303-90371314	GGATGACTCAG	+	6.14
JUND(var.2)	MA0492.1	chr1:90371609-90371624	TATGACGTCACCTTC	-	6.02
TFAP2A	MA0003.3	chr1:90371048-90371059	TGCCTGAGGCT	-	6.32
TFAP2B(var.2)	MA0812.1	chr1:90371048-90371059	TGCCTGAGGCT	-	6.62
TFAP2C(var.2)	MA0814.1	chr1:90371048-90371059	TGCCTGAGGCT	-	6.62

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_02831

chr1:90359418-90403739

HFSCs

Enhancer Sequence

AAAGTTTGCT CTTTTGATTG TGTGAACGAG GGGATTGGGA AAGATTTCCC TAAGAAGAAA 60
TTTAGGGGTA TCATCTGAAT CTCTGACAAG GACCCCTAAG CTTCACAAAC TGTCTTCTCC 120
CGTTAGCAGC ACTGTTGGTG CCTGAGGCTC AGCAACACAT GGAACCTGCA AACTACGTCA 180
CAGCAATTCT TGATTCACTT TCTCCTTAAG AGGCTCCAGT CTCTGCCAGG CGATAAAAAA 240
GGCAGTTGTA GCCACTGGAC TCACTCAGCA AACCGTATGT CCTTTCCTAC AGTACAAAGA 300
GCTGAGCTAG CCGATGCTGA ACACGTCAAA AAGAATGCCT GCCAATGGGT TTTCCAGGGC 360
CCTATGGCCG ATTGGAGGCA GCTGGAAGCA GCTGGATGAC TCAGGATAGG AACCGGCCCA 420
GAACTTGACT AAGTCAGGGC AGAGGAGACC ACATCCTGTC TCAGATTTCT GCTTCTCATT 480
AACTGGAGGC TGTGTATTCA GAGCTCTGTA GACATTAATC ACATCCCTAA ACACCCGGGG 540
GGACCTTTTA ACACCGAGGT GGAGTGTGTG TCCCACAAGG TCAACAGAAG TCATTCTCAA 600
AGTCAGTGGT AGAGAAAGAG AGAGAGCTAG CCAGGGTCAT ACTGCCTGGT GGTTGAGACA 660
AGAGGTGGCC CCAAAGGTTA AGGCTGGGTG TGAGGGGACT ATGACGTCAC CTTCATCAAG 720
GAGGGCATGA ATTGGGTTTC TTCATTTGGT CCCTGATGTC TGTCTGTGTG CATTCTCTCA 780
GAGACCTTTG GGATTGGAAA AGGAATCAAA GGAGAGAGGC TGTGTTTGCA AAATGTTGCT 840
ATTTACAGTG CCACTCTCCC TCTTTTATTC TGTATAGGGG CCACATTAAA CTTGCTGATG 900
GCTTAAAAAG TAGCTTCGAG TGACAATGTC TCGCTGAGAG AACCCTGGTA GAGCTGCTGC 960
CTTTTAGGAA TGGCAATTGA GCTCCACCGT TGGCTGGATT AAGTTCTCCA ATCCAGCAGA 1020
GAATTCTGCT GCTGGCCTTA TGTGATCAAA ACCATCAGAC GAGGCGGAGG CCTTGCAGAA 1080
TGTCAAGCAA CATCTTCAGG ATGGTTTGCA CTAAGTTCAG CACTGTGGGA ATGAGTGGGG 1140
TCACCCAGAC CCAGGGGCTG CATTGGCAAC AGCCCCTGGG AACGAGCTGT TCAGAATGAA 1200
TGATTAAACC CAAGTCAGTC ATTAACTGGG GCTCCGAAGC GGCTCGGTGA GGCATTTGTA 1260
AGGCATCTAA CCACAAGCTG CACACGCTGC TGGGACCCTG AGATGGCTGG CTCTGATACA 1320
GAGATCAAAA GCACAGGAAG TCATAACTCC TGGTGCTGCT TGTCAAACAC GTCAGGCTGG 1380
AACCGTCTTC TTCCTGAAAA CCTCTTTCTG CTGTGTTCCT GCCCCCACAG GCAAGGAGAA 1440
CTTAAGGATT CAGGACCCAG CCAGGGAGAA CCCTCCCTCA CAACCCAAAC TGAGCAACCT 1500
CATGGGAGGG GCATTTGCTT AGAATAAGGC TATTTGTTCT CTGGGAAGTG AAGTGTAGCC 1560
CGATAGACCA GTTAATCATC TACATAAGCA AGTTTCAGAT GAACTTAATA AGATAAGCTG 1620
AATTAGGTCC CTACAGGGAG CTGGGAAGAG GGTAAAGGTC ACCCCAACTT CCCAACTCAA 1680
ACTTCAAGCC TTTTTTTTTT ACTGATCTCC ACATCAGGAT CTTACTTATT TATGAAGAGT 1740
GCTCCCAGGC TCTTAAGACC CCTTTCTCTC TCTCTCTCCT GAGAGTCACC TCTTCAAGAG 1800
GGTCCTAGCC ATGAAGGTCC CGCCCCAAGG ATGCAAGTTG CATGGCTGAC TTCTCCCAAA 1860
GACAAGTTCC TAAGAGCTGA GAACATACTT CCTTCTGCCT CCTCCAGGGC CTGTTTGAAA 1920
TCCCTTTCTG CCTCGTTTCT GAGGTTTCTG CTCAAAAGTG TGAGCTGTGG AGGGCCAAGG 1980
GAGTAAAGAT GACTCTGCTC CCTCCCTTCC AGCGTTGAGT CTTGTTTTTC CATCAGTAGA 2040
CTTAGTTCAT CCCTTCCTAG TAAAGTCTCA CCCATTTCTC TCCACTGTCT CAAAACTGTC 2100
TCCTCTCTTC TTCCCTAAGC TCCATGGATT TCTGGGAATG CTATGGTGAA TTCTTAGCAG 2160
CCAAAGACAA CAGAAAATTA AGGGGAATGG TGACAGAAAG CCTGCTGAAC CCTAGAATGC 2220
TGTACGCAAG CGGAGGAGGC TCTTCCTGCT TCGCGCACTG CTCACTGAAG TTCCATGATG 2280
CTCTGCGGGA GTGGTGTAGT TAGTTTCAAG TGAACTAGCT AGCCAAGATT AGGCAGACCC 2340
CTCTTCGCAC CTTAAGGCTA ATTTTCAAAG CATGTTGTTG ACAGCTCTCA GCCACACTCC 2400
ATGTGGCACA ATACTCTAGT CACAGACTTC ACTAGCATCC GCCAGCAACC CGACTCAATG 2460
ATTCGGGAGA GCCCAAGCCA TTTCTGCACA GAAGGACTTT TGAAGGCTGT TTTGCAATGC 2520
TATCCATTTC CGCTCTATCG GAGCCGCTTG GCTTCCCGCA AAGCACTGAG AACCATAGTC 2580
AGGCAAAGGT CCCTCTCATT GGGAGCACAG GCAGCTGAGC CCTTTCAGAA GCACTTCCAG 2640
GCAGGGCTCC TTTGCCGTCA GTAAATATGT GCTCACCGAG GAACGAGCAG TGTGTGTGCG 2700
CGTGTGGGTT ACGAAGGATG AAGATTATGC AGGGCCAACA CACGGCTTGG AAACAGATCA 2760
ATGGGGCTGT CAGGAAAACT CCATGAAGAA AAGTCAAGCT AAGAAGGAGG 2810