EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-00429

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr1:87904180-87904690

Target genes

Number: 9
Name	Ensembl ID

Sp110	ENSMUSG00000070034
Sp100	ENSMUSG00000026222
Itm2c	ENSMUSG00000026223
Gpr55	ENSMUSG00000049608
Spata3	ENSMUSG00000026226
2810459M11Rik	ENSMUSG00000026227
Psmd1	ENSMUSG00000026229
Armc9	ENSMUSG00000062590
Ncl	ENSMUSG00000026234

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr1:87904608-87904627	CAGTGCCCCCTAGTGGTAG	-	7.88
Mecom	MA0029.1	chr1:87904232-87904246	TCCTATCTTGTCTC	-	6.07
Mecom	MA0029.1	chr1:87904216-87904230	TTCTATCTTGTCTC	-	6
TBX20	MA0689.1	chr1:87904189-87904200	CTTCACACCTA	-	6.62

Enhancer Sequence

TAACAATGAC TTCACACCTA CTCTGCACTC TCTCCCTTCT ATCTTGTCTC CCTCCTATCT 60
TGTCTCCCTC CTCTCTTCCC TGAGGGCAAG AATCGCCATC CCTTTCGGAT CTTTGGAGTC 120
AGCTGAGAGT TGAGGCTTCC AAGACTGGAA CTGGGTCCCC AGGAAGAATG AAAAGGAAAA 180
GAGATACACG TAGGAATGAA ACCCCCAGGC AACAATAGGC TGACCTCTCT CTTCCAACCC 240
CACGCACTCC TCTAGCCAAA AAAAAAAAAA AAACAACGGT CCTGAAGCTT TGAAGACAAA 300
AGCAGAGGAC AAACTTTGAA GAGAGTTCCA AGTTTGCATA CACCAGTCCC GCCCCTAGGG 360
AATTCCCAGG GTAAACCTAG ATCAAAGAAC GGGCTACAGT GCCTCTGGTC TTCTAACCTG 420
CAGCCATGCA GTGCCCCCTA GTGGTAGCGG TCTCTTTTGG TTTCCCTAAC TCGGCAGAGG 480
ACATCTGATT CTTCTTTAGA TAGACTTGAA 510