EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-00130

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr1:39505620-39507870

Target genes

Number: 5
Name	Ensembl ID

Rpl31	ENSMUSG00000073702
Tbc1d8	ENSMUSG00000003134
D1Bwg0212e	ENSMUSG00000003135
Rnf149	ENSMUSG00000048234
Creg2	ENSMUSG00000050967

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myod1	MA0499.1	chr1:39506389-39506402	AGGGACAGCTGCG	-	6.87
Myog	MA0500.1	chr1:39506392-39506403	GACAGCTGCGG	+	6.32
ZNF263	MA0528.1	chr1:39507444-39507465	AGGGCAGGGGAGGGGAGAGGG	+	6.01
ZNF263	MA0528.1	chr1:39507343-39507364	GGAGGGGGAGCAGGAGGGGGA	+	6.09
ZNF263	MA0528.1	chr1:39507449-39507470	AGGGGAGGGGAGAGGGAAGGG	+	6.42
ZNF263	MA0528.1	chr1:39507340-39507361	TGTGGAGGGGGAGCAGGAGGG	+	6.79
ZNF263	MA0528.1	chr1:39507439-39507460	GGGGGAGGGCAGGGGAGGGGA	+	6.93

Enhancer Sequence

TTTTAAGGTG GCTAAAATAA TTTTTTGTTT AACTTTTTAG ACAGGGTGAG CTCTATAGTC 60
TCTCTTTCTG GACTGGGAAG GTTGCTTTTA ATCTCTGCTT TCCCTGCCCT TGCACACCAG 120
CTGATCCCCT CAAACTCCCA GAAGGACCAA CACCAGGCCC AGCACCGCCA CCATCCTTCG 180
GGCCAGAACT AGTAAGGATG GGGTCCAACA TGTGAGGCTC TCGCTGGTTC CTGGCAACAC 240
ACCAGCCCCA GCACCTCCGG TCCAGGGCCC CGGCCAGCTA AGTCCTCTCA GGTAGTTCTT 300
TGCAGAGACT GAGGAGCCAC CACTAATACA AGGTCCTCAG CATCCAACCC TAGGGTCTTT 360
CAACTCTCCC TCCATACACA CCTCACATGA AGCCTCATGT GGGGACTTTG GTCAGGCTCC 420
TGATCTTTCA ATGATTCCTG TGGAGGTTCT CGACTTCTGG CTACAGTGCC GTGTCAAGGG 480
CCTCACACAC CAACTGACGG CAAGAGCCTG AGGAGCAGCT TTGGCTTGGG AAATCTGAAC 540
CCACTGCGGT GTTTCCCTCA ACACCATGGC TCATCTCTCT GGCACTCACA CCTCAAAAGC 600
GAGGCACAAC CCTGTTTCCC TCACCACTGC ACCTGGCCTC CGAACACTAT TCTATCTGCA 660
TTATGAAAAC GGCAGGCCTT CTCGCTGGTC ACGTGAGAAG CAGATAAAAC AGGATGAGGG 720
ACAGGAAGGT ACCTCTTTCC CACAGAGCAG ACAGAGAAGC AACTGAGCCA GGGACAGCTG 780
CGGACTCGGG TCTTTCTATC CCTCAGTTGA CTTGGCTGCC TTTGTGCAGT CACTGGAGGT 840
CAGGAAAGGA GTGAAGGCCA GACTTGTCAT TCCAGTGAGG GATGGGGGCC AAGAGCTGGG 900
TTGTCCTAGC ATCTACAACT CTAGTTGGAA AGTCTAATGT GGAGGTGCCC GTGTGAAAAC 960
CTCTCCTCTC TGCAGAGCAC ACTGGGGATG GGGCACCTCG CTGCTCGGCC TGCCTGGGAG 1020
CCCCTCATAC CTCCAACCTG ATCTTCAGCC AAGAAAACCC TGGAGAGGTC TGGAAATGGG 1080
TGTGGGCTGG TGGGTGTGGT CTAGAACAGC CCCTGACAGG AGGAGCTGGC CTGTGTGGGC 1140
AAGACTGAGA AACACTAGGT CTACCCAGTA CCCTATTGTT CTGTACAACC AAGAGGGGGC 1200
CTTGGGGATC AGTCAATACT ATCTGCCTCA GAGAACATAA GACACAGGTA AGCCGCCTAC 1260
AATCCAGGAT GACAACGGAT GGAGCACCTG ATCGTCTCTG TCAGGTAATA CAGGGCAGCT 1320
GGCCTCTGTA AGAATGAGAG TCTCAGGGGG GACAGACTCA CACAGGAGGT AATAAAGGCC 1380
AAGGGCCATG CATGAAGCTG ACCGTACATG TTAAGCCAAC CTTAACAGCT CGCTCACAGC 1440
CACGGGCCAA GGAGCCTTAA GGAGGCAAGC CTGGAAGGAC ACAAGAATGC AACATCATAC 1500
TTTAGCCCCA AGTCCCTGGT TTTACTCATG TTACCCTTGC TATGCTGAAA TGTTCAGGAA 1560
TCGTTGCAGC ATCTAAGTGT TTCACGATTT CTTTTCCCTC CTTTCTTTTC TTCATTTCCT 1620
TCCTTTAAGC TTGAGGAACG TTTTATAAGA GTTTGAGGGC AGGGAGGGTG GGGGAAACAG 1680
GGCAGGCAAG CTGTAATCCC CACAGCTGCT AGGGGAGGGG TGTGGAGGGG GAGCAGGAGG 1740
GGGAGTCATG CCTCCTGAGA TGGGAGAGCA AGAAAGCAGG CAGTCTCCTC AACATCCACA 1800
GAGGGCTCTG AGCAGCTGTG GGGGAGGGCA GGGGAGGGGA GAGGGAAGGG AGGGAGTGGA 1860
AGAGAGTGTG GGAAGGAAAT GGTGGTAAAG CCCAGAGTGT CAAGGCAAAG AGGCTTAGGA 1920
AGCCAGTGGG TATCCAAATA AGAAATGGAG GGCAAGAAAA GGAATGCTCA GGCCTTCGGA 1980
GTTTGAACTC TCGAAGCTGG GCAGGCTTGG CAGTGAACGT TGCCAGCAAC TGCCTTCTAA 2040
CCCAATTCTA TTCTGTTATT CCCCTGGCCC CGTCGAAGTC GTGGAGCATG TTAATACCAC 2100
AGCTGACTTA CACCAGGACA ATGAACGACC TAAGAGAACC CAGAGCAAGT CTCCAACTCA 2160
CCCAGTGGAA TTAGTCAAGG TTACCCGTAG TGCTTTGGAG GGGAAAAAGC ATTTCAAGGG 2220
GCCTTGTACA GAGAAAAAAA AGAGTAATGT 2250