EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM147-19853

Organism

Mus musculus

Tissue/cell

Th1

Coordinate

chr8:124961920-124963270

Target genes

Number: 8
Name	Ensembl ID

Zc3h18	ENSMUSG00000017478
Il17c	ENSMUSG00000046108
Cyba	ENSMUSG00000006519
Mvd	ENSMUSG00000006517
Snai3	ENSMUSG00000006587
Rnf166	ENSMUSG00000014470
Ctu2	ENSMUSG00000049482
Fam38a	ENSMUSG00000014444

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFYA	MA0060.3	chr8:124962762-124962773	TCTGATTGGCC	-	6.02
TFAP2B(var.2)	MA0812.1	chr8:124962205-124962216	AGCCTGAGGCA	+	6.14
TFAP2C(var.2)	MA0814.1	chr8:124962205-124962216	AGCCTGAGGCA	+	6.32

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03493	chr8:124960655-124962892	Bone_Marrow
mSE_12084	chr8:124961554-124962676	Spleen

Enhancer Sequence

TATAGGCTGA AAGTACAGCA GAGAGACAGA GGCAGGGTAA GGGTTAATGT CTTACACTGC 60
TCTGCTAGGA GTGCCCTCCC CAACACACAG GAAATGAAAT TTCTGAGAAA GCAGAGCTGG 120
GGCTGACAGC TCCCAGCTCT GTCTTGCTTC ACTCGGTACT GGGTTTGGAA ATGTAGTCAG 180
TCTCATAAAC AGCCTCAGGA CCTGGGGTGG GGAAGTTTCT TTGAGGAGCT GCACCCAAGT 240
GAAGCACTGA GGGAAGAGGA GACAATGAGA AGGCCACCAG GTGAGAGCCT GAGGCACAGG 300
GAAGGCAGTA GGGCAGGCAG TGAGGTAAGC TTGCTGTTCA TCGGCATGGG GCCTTCCTTG 360
AGTCCAGCAT TCCTGAGAAG GTGACCCTGC CTCAAGGCTC ACCTACACCT CCAGTTCAGG 420
ACAACACAGG TTATCTATCA CCCCTGGAGC CGATGGATGC GGGCTAAGCT CACCATTGTG 480
AGGGCTGCCT GTGCCAGGGC TGGGGATGCC ACGTAGTGAC CCAAGGCAAG AAGCAGAGAG 540
GATACGGATG GGAGAGGAGA GCTCCTGACC ATGGGGTCGG ACAGCTGGAA GGCAGCCATG 600
CCTGAAGCTG GGCCACGGCC TTTTAGTTCT CCAGGTGTGT GTGGGGAGAG GAGCCAAGGA 660
TATTCCCCAA CCCTCCTCCT CCCACCATGC CTCAAGATAA GTAGCTTGTA TCACTTCTGT 720
CACTTGGGAG CTGAAGGGCC CTCACACAAA TGCATAGAGG GTCTGGTGGT CAACTGCATT 780
CTGGGAAAAG CCAAACTCAG AGTCTGTGTA CAGGGAGCTC CAACAAGCTG TGATGGTTTG 840
TATCTGATTG GCCCTAAGGA GTGGCACTAT TAGGAGGTGT GGCCTTGTTG GAGTGGGTGT 900
GTCACTGTGA GTATGAGCTA TAAGACCCTC ATCCTAGCTG CTTTCAGATG AAGATGTAGA 960
ACTCTCAGCT CCTCCTGCAC CATGCTGGCC TAGATGCTGC CATGCTCCTG CCTTGATGAC 1020
AGTGAACCGA ACCTCCGAAC CTGTAAGCCA GCCCCAATTA AATGTTGTCC TTTATAAGAC 1080
TTGCCTTGGG AGCCGAACGT GGTGGCGCAC GCCTTTAATC CCAGCACTCG GGAGGCAAAG 1140
GCAGGTGGAT TTCTGAGTTT GAGGCCAGCC TGGTCTACAA AGTGAGCTCA GCCAGGGCTA 1200
TACAGAGAAA CCCTGTCTCG AAAAACCAAA AAAAAAAAAA AAAGACTTGC CTTGGTCATG 1260
GTGTCTCTTC ACTGCACTAG AACCCTAAGA TGATAGTCAG GATGCTGACA GTCCAGGGAA 1320
CCCCCTACTA CCACAGAGCA GAACCCAGGT 1350