EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM147-18057

Organism

Mus musculus

Tissue/cell

Th1

Coordinate

chr7:52719970-52720550

Target genes

Number: 19
Name	Ensembl ID

Rps11	ENSMUSG00000003429
Rpl13a	ENSMUSG00000074129
Dkkl1	ENSMUSG00000030792
Cd37	ENSMUSG00000030798
Rpl14	ENSMUSG00000046721
Trpm4	ENSMUSG00000038260
Hrc	ENSMUSG00000038239
Lin7b	ENSMUSG00000003872
Snrnp70	ENSMUSG00000063511
Kcna7	ENSMUSG00000038201
Ntf5	ENSMUSG00000074121
Gys1	ENSMUSG00000003865
Ruvbl2	ENSMUSG00000003868
Ftl1	ENSMUSG00000050708
Bax	ENSMUSG00000003873
Dhdh	ENSMUSG00000011382
Nucb1	ENSMUSG00000030824
Plekha4	ENSMUSG00000040428
Rpl18	ENSMUSG00000059070

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxj3	MA0851.1	chr7:52720126-52720143	AACAAATAAACAAACAA	+	6.12
Nr5a2	MA0505.1	chr7:52720029-52720044	GAGTTCAAGGCCAGC	+	8.25

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_09751	chr7:52720090-52722263	MEF
mSE_10173	chr7:52720117-52723413	Embryonic_stem_cells

Enhancer Sequence

GGCGTGGTGG CGCACGCCTT TTATCCCAGC ACTCAGGAGG CAGAGGCAAG TAGATTTATG 60
AGTTCAAGGC CAGCCTGGTG TACAGAGTGA GTTCCAGGAC AAGCCAGGGC TACACAGAGA 120
AACCCTGTCT CAAAAAAAAA AACAACAACA ACAAAAAACA AATAAACAAA CAAAACCCCC 180
CCAAAAAAAA TAGGTCTTAG GTTTAGGTAG CTCAGGATAG CCTGAAACTC AGTATTTAAC 240
TGCAGCTAAC CTTCAACTCC TACCGCAAGT CCTGGAATTA CAGGCATGTG CCACCAGATC 300
AGTTTAAGAC CACCTACACT GAGAAATCTT TCTAGGTTTC TCTGGCCCAT CTCAATAGTC 360
TACCTTACAT GTATCCACCA TCAATCAGAG CGCCATCAAG GAAGGGCTAG CTTGCGCTGT 420
TTGGAGCAGA GTTCAGGTGC TGGAGATAGC CCACCACACA TTAGGGCCGA TACATTTGTG 480
GAATGACTAA ATGAAGGTAC AGGCATTTAT TACACAGCCA TCTCTCTCTG TTCCCTGGTC 540
CTCACAGACC TGAGCGGGGT GCACCTCTGG GCTCGTCCGG 580