EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM147-17822

Organism

Mus musculus

Tissue/cell

Th1

Coordinate

chr7:29382900-29383050

Target genes

Number: 18
Name	Ensembl ID

Eid2b	ENSMUSG00000070705
Timm50	ENSMUSG00000003438
Supt5h	ENSMUSG00000003435
Rps16	ENSMUSG00000037563
Plekhg2	ENSMUSG00000037552
Med29	ENSMUSG00000003444
Paf1	ENSMUSG00000003437
Gmfg	ENSMUSG00000060791
Lrfn1	ENSMUSG00000030600
Il28a	ENSMUSG00000059128
Nccrp1	ENSMUSG00000047586
Fbxo27	ENSMUSG00000037463
Fbxo17	ENSMUSG00000030598
Sars2	ENSMUSG00000070699
Sirt2	ENSMUSG00000015149
Rinl	ENSMUSG00000051735
Hnrnpl	ENSMUSG00000015165
Lgals7	ENSMUSG00000053522

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr7:29382938-29382953	TGAACTTTGACCCGA	-	6.1
Hnf4a	MA0114.3	chr7:29382936-29382952	AGTGAACTTTGACCCG	-	7.13
KLF14	MA0740.1	chr7:29382955-29382969	GGCCCCGCCCCCTT	+	6.15
KLF16	MA0741.1	chr7:29382956-29382967	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr7:29382956-29382966	GCCCCGCCCC	+	6.02
Nr2f6	MA0677.1	chr7:29382938-29382952	TGAACTTTGACCCG	-	6.22
RXRB	MA0855.1	chr7:29382938-29382952	TGAACTTTGACCCG	-	6.83
RXRG	MA0856.1	chr7:29382938-29382952	TGAACTTTGACCCG	-	6.98
Rxra	MA0512.2	chr7:29382938-29382952	TGAACTTTGACCCG	-	6.92
SP4	MA0685.1	chr7:29382953-29382970	CCGGCCCCGCCCCCTTC	+	6.44

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_06473	chr7:29381029-29383277	E14.5_Liver
mSE_07389	chr7:29380851-29383257	Intestine
mSE_08111	chr7:29380445-29383202	Kidney
mSE_08998	chr7:29380975-29383224	Lung

Enhancer Sequence

CCCGCGACCC TTTTCCACGC GACCCTCCCC TCCAAGAGTG AACTTTGACC CGACCGGCCC 60
CGCCCCCTTC CGAATAACCG CTCTCCCACG GCGCGTGCCC AGACCCACCC GCCCCCAGCC 120
ACAAACCCCT TGCACGGTAA CCCCCTAACC 150