EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM147-17250

Organism

Mus musculus

Tissue/cell

Th1

Coordinate

chr6:124960450-124961880

Target genes

Number: 29
Name	Ensembl ID

Lpcat3	ENSMUSG00000004270
Emg1	ENSMUSG00000004268
Phb2	ENSMUSG00000004264
Ptpn6	ENSMUSG00000004266
Grcc10	ENSMUSG00000072772
Atn1	ENSMUSG00000004263
Spsb2	ENSMUSG00000038451
Tpi1	ENSMUSG00000023456
Cdca3	ENSMUSG00000023505
Leprel2	ENSMUSG00000023191
Cd4	ENSMUSG00000023274
Lag3	ENSMUSG00000030124
Ptms	ENSMUSG00000030122
Mlf2	ENSMUSG00000030120
Cops7a	ENSMUSG00000030127
C530028O21Rik	ENSMUSG00000030329
Ing4	ENSMUSG00000030330
Acrbp	ENSMUSG00000072770
Lpar5	ENSMUSG00000067714
Chd4	ENSMUSG00000063870
Nop2	ENSMUSG00000038279
Iffo1	ENSMUSG00000038271
Gapdh	ENSMUSG00000057666
Ncapd2	ENSMUSG00000038252
Mrpl51	ENSMUSG00000030335
Vamp1	ENSMUSG00000030337
Tapbpl	ENSMUSG00000038213
Cd27	ENSMUSG00000030336
Tnfrsf1a	ENSMUSG00000030341

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Mecom	MA0029.1	chr6:124961714-124961728	AAGACAAGATAGCA	+	6.51
NR2C2	MA0504.1	chr6:124961765-124961780	TGACCTCTCACCTTT	-	6.51

Enhancer Sequence

GAGAGAGGGT AAGACAATCT TGGTTTAATG ATTTGGGGAG AGATGGGGTC ATCTCAAATG 60
GTTTTTCTTT TTTTTTTTTC CTTTACAGTG TGATAGAATT ATTGAAGTAA CCAACACCAG 120
CGCTTGCAGA GAGAGAGATA AAAGCCTTTT CTTATTGTTT CCCATAGTAC CCAGGAGGTT 180
TTTGTGTAAA AAATTGGTAG TTTCTTTGTT ACCCTTTCAT GGCCACTGGT ACTCAACAGG 240
AATAAAATGT GAAATACTCA GGTGAAGCCA CTAAATGGGC TTACATTTTG TCAGAGATGT 300
ATTCTGCTGT GGAGACACAG GGACTCTGAT TACAGTATAG TCTTTATGGT GTCACTTAGA 360
GAAACAACAA AGGCAAGTTT GGAGTTTCCC ATTCTTGGTG TTCAGTGGAG TGTTTGAGTG 420
ACTCTGTTGA GTGATGAAGA CTCTAACATG AGACAATTTG AGTTTGATGT GTCAGGTAAT 480
ATTTTTCAGA GAACACTGCT TCTTGGATAG TTTGAAATAA AAGAGATAAA ATTATATGCT 540
TTCTGCTCTA GTAAATCTGG GAGAAATCAA AGTGATACCT GATGCTAATA CTGAAACCTT 600
TCTATTTTTT TCGGGGGAGG GAAACAAAAA ATTTTGTTAT GAAGCCCAAG CTAGTGTGGA 660
ACTCACTAAG TAAACCAGTT TGGCCTCGGC CTCGAGGCCA TCTCTTCTCC CTGTGCAAGC 720
TAAGTGTTTG GACTACAGGC ATCGCCACTG TGAATGGCGA TGAAAGGTTC TTTAGTTGAA 780
AAAAATAGCT GTTAAACACA ACAGTTAGGG GCACTGGTTG CTCTTCCAGA GGTCCTGAGT 840
TCAAGCTCAG CACCCCCCAT GGCAGCTAAC AACTGTCTGT AACTGTAGTC CCATGGGATC 900
GATGCCCTCC TCTGTTATAC AGATGAGACA CCCACTGCTT AAATCCATAA ATAAATCTTT 960
AAAAACAGCA GCACTGGAGG GCTGGAGAGG CAGTCGGGTT GGTAAAGTGC TTGTCATGTG 1020
AACATGAGGA CCCAGGTTTG CTGCCCAGAA TACAGGCAGG AAAGCAGAGC ATGGTGGACC 1080
CAGCGCTGGT AAGGCAGAGA CAGCTAGATG GATCCCTGGT GCTTACGAGC TAGCTATCCA 1140
GCTTACCATA ATTGGGGAGG CCTAGGTTAG TGAAAGACCC AATGTGTAAA AATAAACCGG 1200
AGAGCACCTG AGGAATGACT CCTGAGGTTG TCTTCTGACT TCTATGTTCA CTTTCTAAAC 1260
ACAAAAGACA AGATAGCAGG TAATGTAAAC TGAGCCTCCC CGAGTTCTCA GGCCGTGACC 1320
TCTCACCTTT GAGTGGTTGG AAACGCCTTA AGTGGCAGCA TAGGACGGAA GAGTGCAGGA 1380
GTGCTCACCC TACTGTCATC ATCTCCTCGC TGCCAGTAAC TCCTCTGGAA 1430