EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM147-16833

Organism

Mus musculus

Tissue/cell

Th1

Coordinate

chr6:82888050-82889450

Target genes

Number: 15
Name	Ensembl ID

Sema4f	ENSMUSG00000000627
Dok1	ENSMUSG00000068335
Loxl3	ENSMUSG00000000693
Aup1	ENSMUSG00000068328
Htra2	ENSMUSG00000068329
Dqx1	ENSMUSG00000009145
Pcgf1	ENSMUSG00000069678
Ccdc142	ENSMUSG00000079511
Mrpl53	ENSMUSG00000030037
Mogs	ENSMUSG00000030036
Wbp1	ENSMUSG00000030035
Ino80b	ENSMUSG00000030034
Rtkn	ENSMUSG00000034930
Wdr54	ENSMUSG00000030032
Dctn1	ENSMUSG00000031865

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SOX10	MA0442.2	chr6:82888734-82888745	TCCTTTGTTTT	-	6.32
Sox3	MA0514.1	chr6:82888735-82888745	CCTTTGTTTT	+	6.02
ZEB1	MA0103.3	chr6:82889375-82889386	GGGCAGGTGGG	-	6.14

Enhancer Sequence

ACACTTAACT ATTTAAAGTT CACAACAGCT TTTCATGAAT TCCCCTTTGC TCCACCTCTG 60
GCTTTGGAGA ACCAAGTCGT TTGTGTTACC TACTCTGCTT TGCCTTGCCA TCTGGGCCTC 120
TCTGGATCCC TGGATATCAG CGAAGACTGG CATCTGTAAC TCTCTTTGTA GGGTATGGGT 180
TCAGCACAAA CTGAAACCCC AGAGGTTCTG GTCTCAGCTT TGACTTCTGG ACTCAGCATC 240
CGTGTATGTC ATTTGGCCTA AGCATAAGCT TTAAGTTTCT GTGACCCAGT TGTGAGTTGT 300
GGCGTCATTT GTACCCACTG AGAAGAAAAC AAGCCCCGTG CCACACTCAT GTCCAGATCA 360
GCAAAAAGTA TTTAAACTGT GAGCACCATT TATGCTTTTT CCATGTCTTC ATAAAGAACC 420
TAAACCCTAT CTTGTTTTAT TAAATATATA ATTTTTATGT TTCTTTAAAC ATAATGTGTG 480
TGTGTATGTA TGTATGTATG TATGTATGTA TGTATGTATA TTAGTGTCTG TATATATGCA 540
CTATAAGTAA CCACAGAATC CTGTTCCCTC GGAGCTGGAA TTGCAGGTGG TTGTAAGCCA 600
CTGACATGGG TGCTGGGAAC AGAACTCAGA TCTCCTGGGA AAGCCGCCAA ATGCTCTTAA 660
CAACAGAGCC ATCTCTCCAG CCCCTCCTTT GTTTTGTGTG AAGAACTTTG AATGGGCTCA 720
TTGAAGTGTT TTCTAGCACT CAAAGTAGGG AATGGGCAGG GGGAGCAGCG GACATTCGGG 780
GAATTAAAGT TAAAGTGAAT TGATAGCGGA GGATGGATGT CAGCCATAAG GAAAGTGGGC 840
AGGAGGGATA CAGGTCTGGA TGAGGGTGGG AGGGCATTTA AAAGGATGAC GTGGGGGTGG 900
GGGGAATGAA GCTAAAAGGG CGGAAATTCT GGGCTAGGGA TGACCCATTA GAATGAAAGA 960
GCAAGAAGAC AGGGAATAGC AGGAGCTTGG AAATGAAGTG ATGGGTGTGG GTGTATGTGT 1020
GGGCAACAGG GATAAAGGAC TGAAATGGAC AACCTTGGGC AAACCCCAGG CCCTCCATGG 1080
GCCTCAGTAT CCAGGTCTAC AGGGTAAAGG ACTGCACCCT AATGAAAAGA GGGGCTTCGG 1140
GAGCACCCTG GTTGTGTCTT GGGAGCTGAG GTGCAGGGCC AGGTTGGGGG TGGGATAGGT 1200
GGGATGGAGT AAGGTGGGGT GGGATGAGAT GAGATAGAAA GATGCAGGGT AGAAGTCTCA 1260
GCTTTGGTCC CACAGGGGTG TGCACCGTGC AGAGGGGCCT TAGATGGCTG TCACTGGAGT 1320
TAGCAGGGCA GGTGGGTGTG GGCACCTGCT GGCAAGGGCA GGGTACCGTG CGAAGGGCTG 1380
AGGACAAGGG TTCCTGCATC 1400