EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM147-16079

Organism

Mus musculus

Tissue/cell

Th1

Coordinate

chr5:122872680-122874610

Target genes

Number: 8
Name	Ensembl ID

Ppp1cc	ENSMUSG00000004455
Hvcn1	ENSMUSG00000064267
Tctn1	ENSMUSG00000038593
Rad9b	ENSMUSG00000038569
Gpn3	ENSMUSG00000029464
Arpc3	ENSMUSG00000029465
Anapc7	ENSMUSG00000029466
Gm15846	ENSMUSG00000079906

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA

MA0729.1

chr5:122873105-122873123

CCTTGACCTTCTTACCCT

6.21

Enhancer Sequence

ACAACCCGTG AGTTGGAGAG GCGGGGAGGT GGCGGTCCCG GGAGCCGGGG TTGGCGGTGG 60
CGGGGGGACG GTGTGGTCCC GCGGAGGGCT GCGCGGGATC CGGCCTCGGT GGCCTCGGAG 120
TTCTGGCTCC TTCCAGAACG ACGAAGTCCC CTGAGTCCCG GGGACCCAGT CCACCGAGTG 180
TCAGCCGTGG GGGTGCCACC CCAGCGGAGG GAGGGGACCC CACTTTCCGA GACTGAGAGC 240
ATCGGTGGCG GGCGCGGTGG CGCCTTTTTT TAATTTAAAA GGAACCCTGG CAGTCTAATG 300
TAAGGCCCGA CATTGCCGCC GGGGAGTGAC TGGTTTTGTG TGGTTGTGTT TACAAACAGG 360
GGTCTCCTGT AGCCCAGGCT AGCCTGCCCC AGGCTGTGTG TGTGTGTGTG TGTAGTCAAG 420
GAAGACCTTG ACCTTCTTAC CCTCCTGCCT ACGCCTCCCA GAAGCTGGGG GGGGGGGGTT 480
AACTGGTGTT TTACACCCCC ACCATGCTCT CAGTGTGCGT GTGGACCTTG GGGATCGAAC 540
CAGGGATTTC AGGCGTGCTA GGCAAAACAC TACCGATGGA GTGACAGTTC TATCTAGCCG 600
GGTTTACTGC GTCTCAAAGG AAGCCCGGGA CAGTTGTAGG CTTGAATTGC CTGTAAGGGC 660
CTTGCTTAAA AATTTCCCCA TCATTGCTCA CTCTTCGACG TGGCTCCGCA AGTCAACCTA 720
GTCATTCCTT TTCTCTAATT TCTCCTCCTG CCCGAGCGCT CTCAGAGCAA GCATTGGCAC 780
CGGTGGCTTC ACTTTAGAAC CGCTGCCTGA GCCGGGCAGT GGTGGCGCAT GCCTTTAGTC 840
CCAGCACTTG GGAGGCAGAG GCAGGCGGAT TTCTGAGTTC GAGGCCAGCC TGGTGTACAG 900
AGTGAGTTCC AGGACAGCCA GGGCTACACA GAGAAACCTT GTCTCAAAAC AAAACAAAAC 960
AAAAAAAAAT GCTAAGGAAA TGTGTTTATT ACAGGGAGGT CCAGTAGGTC GACCAAGATC 1020
ACACCCTGGA GAACATAGAG GAGCGAGTGG ATCTGTCTAT GATTGGAGAT AGTTTGTATT 1080
TCAGTCCACC ACTGTCTAGT GCTTCCAAAG AACATTACAG TAGCCTTCTA CTCCGTGCAG 1140
ACATTTGCAT TTGGCGTGGC TGAGGCTAGT CTAGTGAGAC AGCCAAAGGG CTGTGAGGGG 1200
CCTGTAATTC AGTCACTACC CCCCACTCCA ATTCATTAGT GTGCTTTGGA CCGACTAGGC 1260
ACACACATCA TTTGGTCACC AGCTTCTTTT TTTTTTTTTT TTTAAAGATT TTATTTATTT 1320
ATTTATTTTT ATTTATTATA TGTAAGTACA CTGTAACTGT CTTCAGACAC TCCAGAAGAG 1380
GGCATCAGAT CTCATTACGG GTGGTTGTGA GCCACCATGT GGTTGCTGGG ATTTGAACTT 1440
CGGACCTTCG GAAGAGCAGT CGGGTGCTCT TACCCACTGA GCCATCTCAC CAGCCCGGTC 1500
ACCAGCTTCT TAGTGTGACA CGAGGGACAC TGGTCTCTGT CAGCCTTCTG TGTTGATGTT 1560
GAGGACTTTT CCCCAGAATC TTAGTGGTGC TTCATAGCAA ATGGTTTCCT GTGTTGGGGA 1620
TAATGCCCTA ATCTTTACTC TTGGGTCGGG ACAACGTTCT AGCACTGTTT GAACGCTATA 1680
GAGCGTCCTC CTCTAGTTAG ACTGAATTGG GCTAACCCAT GCTTTTCCAC GTTAGGTTAG 1740
ATTGGCAAGT TCTTAGCTAC AGGAAGCAGA TAAGTTCTGA CCTTCATCCT TTATGTTTTG 1800
ATATTTGTTG AAGAGACAGT GTACACACTG TCCAAAAACA AAATAAGACT GATAACATAG 1860
TTCAGTGGTA GAATTCTTAC CTAAAATGCC TTGCAGCTGG ATCTAGCCTT TACAGTTACC 1920
TAAGATATCG 1930