EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM147-10620

Organism

Mus musculus

Tissue/cell

Th1

Coordinate

chr19:6397710-6397860

Target genes

Number: 8
Name	Ensembl ID

Fau	ENSMUSG00000038274
Cdc42bpg	ENSMUSG00000024769
Men1	ENSMUSG00000024947
Map4k2	ENSMUSG00000024948
Sf1	ENSMUSG00000024949
Pygm	ENSMUSG00000032648
Rasgrp2	ENSMUSG00000032946
Hmgb1	ENSMUSG00000084221

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr19:6397820-6397835	TGGCCTTTGACCTCA	-	6.67
NR2C2	MA0504.1	chr19:6397820-6397835	TGGCCTTTGACCTCA	-	6.23
Nr2f6	MA0677.1	chr19:6397820-6397834	TGGCCTTTGACCTC	-	6.48
RXRB	MA0855.1	chr19:6397820-6397834	TGGCCTTTGACCTC	-	6.21
RXRG	MA0856.1	chr19:6397820-6397834	TGGCCTTTGACCTC	-	6.03
Rxra	MA0512.2	chr19:6397820-6397834	TGGCCTTTGACCTC	-	6.37

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03553	chr19:6397339-6402851	Bone_Marrow
mSE_12354	chr19:6397326-6402179	Spleen

Enhancer Sequence

CGGTGAGCTG CTGGCGAGGC TGCGTGGGGC GCAGGCATGG GGCTCATGGA GGAACAGGGC 60
TTGGGTGGGC CGGAAGGCTC CTGCCGTCTG CTGCGCCTGC GCCAAGGACC TGGCCTTTGA 120
CCTCACAGAG CTCTGCTCTC TCCTTTCTCC 150