EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM147-10406

Organism

Mus musculus

Tissue/cell

Th1

Coordinate

chr19:4137210-4138540

Target genes

Number: 17
Name	Ensembl ID

Ndufs8	ENSMUSG00000059734
Gstp2	ENSMUSG00000038155
Cdk2ap2	ENSMUSG00000024856
Pitpnm1	ENSMUSG00000024851
Aip	ENSMUSG00000024847
Cabp4	ENSMUSG00000024842
Ptprcap	ENSMUSG00000045826
Rps6kb2	ENSMUSG00000024830
Carns1	ENSMUSG00000075289
Tbc1d10c	ENSMUSG00000040247
Ppp1ca	ENSMUSG00000040385
Rad9	ENSMUSG00000024824
Clcf1	ENSMUSG00000040663
Pold4	ENSMUSG00000024854
Ssh3	ENSMUSG00000034616
Ankrd13d	ENSMUSG00000005986
Kdm2a	ENSMUSG00000054611

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr19:4138102-4138123	TTCTAGTTTCTGTTTCAGTTC	+	7.36
RREB1	MA0073.1	chr19:4137800-4137820	TGTTGGTGGGGGGGGTGGGG	-	6.14
RREB1	MA0073.1	chr19:4138422-4138442	ACACATCCCACCCCCACCCC	+	6.4
RREB1	MA0073.1	chr19:4137811-4137831	GGGGTGGGGTTGGTTTTTGT	-	6.51
ZNF740	MA0753.2	chr19:4137805-4137818	GTGGGGGGGGTGG	-	7.52

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_00606	chr19:4113071-4155496	pro-B_Cells
mSE_01385	chr19:4093691-4170314	Th_Cells

Enhancer Sequence

CTCCCACTGT GGACCCAGGC AGAGCATCAC AATCGGTTTG ATGGCAATGC CACACTCTTT 60
GTCTTCCCAC CTGGGCTCTG GATCTACAAA GGCACACCCA GTTCCTTGCT GTAGAGGGGT 120
TTCTTGCATA GGGGTGAGGG TGGGTGATCA GGGACACTCC TGATCACCGT GAAGGCCAGG 180
GGGCCAAAAA AGACCTGGCT TCAGAGCAGG CAGCCCAAGT TCAAATCCTG TTGCTCTGTG 240
AGACCTTGGA TGGCTTACCA ACCCTCCTGC TCTCATCCTG GGATGGACCT GGAAGAAGCT 300
ACTCCATGGG ACAGGGCTAT GGCTGCCGGA AGTCAGGGCT GTAGAGCTGA GTGGGAAGCA 360
CTAAATAGCT TCCCAAAGGA TTGCTACGGT CATCACCCCC AAAAACACCA ATAGGCAGGT 420
AACAGCTTTG GGTGGGGAAG AGATGACTGA CCCTGAATGC TCATTGTGCT TTCTGTTGTT 480
GTTTGAGGCA GGGTTTCTCT ATTCTGTCCT GACTGGCCTA GAACTCATAG AGCATCTCCT 540
TCCTGCCGCT GTCTCCCCAG CGCTAGGATT AAAACAATGT GCTGCCACTC TGTTGGTGGG 600
GGGGGTGGGG TTGGTTTTTG TTTGTTTTGC GTTTGGGTTT TTTATTTGTC TGGTTGTTTT 660
GTTTTTGTCA ACTTGACATA AGCTAGGATC ATCTAGGAAG AGGGAACTTT AGTTGAGAAA 720
ATGCCTCCAT CAAATTGGCC CATAGAAAAG TCTGTGGGAC TTGTTCTTGA TTAACGATTG 780
ATGTACGAGA GCCCATTCCA TTGTGAGTTG TACAAGGCGG GAAGGTGGTC CTGAGAGGTA 840
TAAGGAACTT AGCTGAACAG GAGCCTGAAG AGCAAGCCAG TAAGCTGCAT TTTTCTAGTT 900
TCTGTTTCAG TTCCTGCCCA GGTTCCTACC CTGAGTTTCC TCAGTGATGG GTTGTAAAGT 960
AATACAGAAT AAACCCTTTT CTCTCCCAGT TCCTTTTGGT CATGGCGTTT ATCACAGCAA 1020
TAGAAAGCAA ATCAGGATAC GCACATCAGG GCAAATCCCA TCCCCTGCTT AGAAACTGTA 1080
AAACTAAAGA AAGCCATTGC AGCAGAGCGC TCCATGGATA AACATGCTTG CCACCATGCC 1140
TAACGACCTG AGTTGAGTAG ATCCCTGGAA CTCCCATGAT AGAAGCACTC ACTCAAATGC 1200
ATGCTGTGGC TCACACATCC CACCCCCACC CCCACTAATA ATAACTACAA ATAAAGGTAA 1260
CTCAACGACG GCCCACCCAC CCTCTAGGTA ACCAGGCTGG CTCCCAACCC AATCACCCGG 1320
CAGGGCTCCA 1330