EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM147-01114

Organism

Mus musculus

Tissue/cell

Th1

Coordinate

chr1:167973210-167974600

Target genes

Number: 4
Name	Ensembl ID

Rcsd1	ENSMUSG00000040723
Creg1	ENSMUSG00000040713
Cd247	ENSMUSG00000005763
Pou2f1	ENSMUSG00000026565

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr1:167973867-167973877	GCCCCGCCCC	+	6.02
RREB1	MA0073.1	chr1:167974270-167974290	ACACAAACCAAACGCCCACA	+	6.15
RREB1	MA0073.1	chr1:167974412-167974432	GGGGTGGGGTGGGGGTGGGG	-	6.27
RREB1	MA0073.1	chr1:167974406-167974426	TGTAAGGGGGTGGGGTGGGG	-	6.97
Sox3	MA0514.1	chr1:167974150-167974160	AAAACAAAGG	-	6.02

Enhancer Sequence

GTAAAGTGTC AGTATCCCCA TACCTTCACC CCCAAAACGG CAGAAGATGG CAGTGTCTGC 60
TCCTTAGACT GTATGGGAAG ACTAGATAGA ACAATGGACA CACGTGCATG CAGTAGTCCT 120
TGTTCCCCAA CAAGACTTCA TTCTACTAGA AGCCAATTGA CCCTGAGCTT GGCACTGTGT 180
TCCCTTTTTA TTTCTTTTAG ACAGCCAATT TTTTTTTTTT AATTGGGGGA ATGGGTCTCT 240
AGGGGCGGAC CTGGGGCCCT CACTGCACAG CTCGCTCATT GGCACCATCT CCAGAATCCT 300
GTGGCTTCAT CACATCTGGA AGCTCTGGAG GGCTGAGAAG GGCTTGACGC GCGGAGCTTC 360
GAAGGTGTCA TCTGCTCGGA AGGCCAGGTC CACTGTGGCT GGCGCCTGTG GCCATGCTGT 420
CTAACTAGTG AAGCCACACT CGGAGTTTTT CCATCATCAA GAAGCTGGTC GTCCTTGTAA 480
AGTCGCTGCT CCTCTGGCGG CCGCTTGAGG ATGCCCTCGA GGAGATGCGC TCCAGTTCCA 540
ACAGGGTGCT CTAGCTTCCT TAATGTTCTT AAAGATGGTG GTCTTGCGCG GGATCATAAG 600
AAACACGTCC ATCCCCGCGG CTGCTTCAGG CTCAATTAGC TAGCGCGGCT GCGCTCCGCC 660
CCGCCCCTTC TGTGTTACTT TTATCATCAG TATTGTCCCA CTCCAAGGTT TATACTCTCA 720
ACCTTACACT GTCAACTTAA GATACTGCAC AGTGCAGCAC TGATTAATCA GTAGCAGGGT 780
GTTTCCTCCT CTGTGTCATC ACTACACTCT GGGTTTAATG TCTCCCATCC CCCACCCAGT 840
AACTGTGTCA GGCTTGTGGG ATAGGTTTGT GACTTAGCAA GTGTTTACCT AGTACATAGC 900
ATGTCCAAGG CCCCAGCTTC ATTCCCTGGC ACAACAAAAC AAAACAAAGG CAACTGTGGG 960
CTCGTGAGTC AGCTCGCCAT CAGCCACCAG CTGCTTCCTG CCTGTAGGAT GCAGCTTTTG 1020
TCTCCCACAT ACTCTCAGCA TAAAACCCTG GTCCAAGCAC ACACAAACCA AACGCCCACA 1080
GTTGAATGGT TCAGTGAGTG AATTAATGAA AATTATCACT GAAACAGCAT CTCAACCTTG 1140
CTTCTTACAA ATAAAATATA ATTTAATCTC AAAACATTAC ATTTACTTCG TGTATATGTA 1200
AGGGGGTGGG GTGGGGGTGG GGAGATTACA TACTCAGACC ATGAGCAAGC TTGTGTGAGC 1260
CCCAGAGATC AGACGAAGGT CGTCTGCCTT GGTGGCAAAC ACTTCTACCC ACTGAGCTAT 1320
CTAGCTGGCA CCTATATCAT TTTTCAGTGA CAGCATCCTT AATGTGGCCC TCCCCAGAAA 1380
AAAAGTCTTC 1390