EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM146-15853

Organism

Mus musculus

Tissue/cell

Testis

Coordinate

chr9:21528320-21529020

Target genes

Number: 13
Name	Ensembl ID

Ilf3	ENSMUSG00000032178
Qtrt1	ENSMUSG00000002825
Dnm2	ENSMUSG00000033335
Carm1	ENSMUSG00000032185
1810026J23Rik	ENSMUSG00000048429
Yipf2	ENSMUSG00000032182
Smarca4	ENSMUSG00000032187
Spc24	ENSMUSG00000074476
Kank2	ENSMUSG00000032194
Dock6	ENSMUSG00000032198
Rab3d	ENSMUSG00000019066
Tmem205	ENSMUSG00000040883
Ccdc159	ENSMUSG00000006241

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr9:21528796-21528811	CAGGGGCGTGGCTTG	-	6.21
SP4	MA0685.1	chr9:21528794-21528811	TTCAGGGGCGTGGCTTG	-	6.02
TFAP2A	MA0003.3	chr9:21528917-21528928	TGCCTCAGGCA	+	6.02

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_08538	chr9:21524909-21534629	Liver
mSE_11483	chr9:21527191-21535852	Placenta

Enhancer Sequence

CAGGGGCAGC CGTCCTGAAC TCGGAGAGCC CCGAGTGGTT TTATTTTTGG TCGAGAAATA 60
CAACCATTCG TGCGAACTTG ATGTGATGTC CTTCCCACGT GGCTGGAGGG AAGTGTTTTG 120
GAAATAGGGT GCCAGAGCTG TAGGGGGTCA GAGTGGGTTT GGGGAGTCCG GTGGGTGCTC 180
TCCCAAGTCA GAGGTGTCTT TCAGAGCTAT GTGTGAGGGA ATCCAAGAGG AGGGGTCCCA 240
TCATTCGTTT TAAGGGCTGG GGAGACCCAG GCCCAGCTGT TCAACTTTGG GGTCGCTAGT 300
CGTAGTTACA GGACTTGGGG GTCTCCACAC TGCACTCAAA CCCGGCTACT GCCGCGTGCC 360
CCAAAACTCC GCCCTAACCC CACCTCCCAC CGCACCCCCG AGCTCCTATT GGGTGCAGCC 420
GGAACAGGCG AGCCTCGAGC CACTCCCCTC GCCCAATGGA GGAAGAGGAT GATGTTCAGG 480
GGCGTGGCTT GCACGACCCT CCCGGGTGGG GTGGGGCTAC ACATCCGGGC CGGCTGGGTC 540
CTCCTTGTGA GCCTTCAGTC CCTACCTTGT CCCTACTTCC CTGGTTTGGT GCAGATGTGC 600
CTCAGGCAAC CCAGACACCC GTAGCTGAGA CCATCAGGCA GGGAGGGCCA GGGACCTGGC 660
AAAGACTTTT GCAGGCCTGG TTCGTTCCCA CTCTCTGAAC 700