EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM146-13784

Organism

Mus musculus

Tissue/cell

Testis

Coordinate

chr7:16899160-16899590

Target genes

Number: 9
Name	Ensembl ID

Zfp541	ENSMUSG00000078796
Meis3	ENSMUSG00000041420
Dhx34	ENSMUSG00000006019
Gpr77	ENSMUSG00000074361
Prr24	ENSMUSG00000091811
Ccdc9	ENSMUSG00000041375
Sae1	ENSMUSG00000052833
Zc3h4	ENSMUSG00000059273
Npas1	ENSMUSG00000001988

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr7:16899427-16899439	GCTATTTATAGC	-	6.32
MEF2B	MA0660.1	chr7:16899427-16899439	GCTATTTATAGC	-	7.22
MEF2D	MA0773.1	chr7:16899427-16899439	GCTATTTATAGC	-	6.32
TBP	MA0108.2	chr7:16899423-16899438	CCGGGCTATTTATAG	-	6.41

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

mSE_01526	chr7:16827176-16911962	Th_Cells
mSE_03479	chr7:16898773-16900087	Bone_Marrow
mSE_09438	chr7:16895736-16900370	MEF
mSE_10563	chr7:16898079-16900208	Embryonic_stem_cells
mSE_11067	chr7:16898186-16900188	Olfactory_bulb

Enhancer Sequence

CGGCGGGTGA GTGCGGGGCG GCAGGCAGGT GGGGAGGGGG CTGCACACCC CGCCAGATGT 60
GCTGCAGCTG CTGGCCCAGC GCGCGCGAGG TCGCGCCAGG GACAAGCAGA TGGGGGTGTG 120
GGGGAAGGAA TGGATCTGCT GGATGCTGGG ATCCGGTGTG GGCCAGATCA GGACTGGAGC 180
CCCTAGCCAG GGTCGGGGAA AGCTACTCGG AGCCCGCGGT CGCGGGGACT GAGGGCGGCG 240
CTCGGCGCGG CGGCTCCTAT ATCCCGGGCT ATTTATAGCC GGTGAGTCAG CAACGCGCCG 300
CGCCCGCCGC GCCCGCCCCC GCCGAACTGC GCCCCGCAGC GCCTCCCGCC GGCTGCTTCG 360
CGCCGGCACC TCCCTGGCTC GGGCCCGCCA CTTGGTGCTC CTAGATCGGA GCCCCCCATG 420
AAACCCCCAG 430