EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM146-12964

Organism

Mus musculus

Tissue/cell

Testis

Coordinate

chr6:29558710-29559360

Target genes

Number: 10
Name	Ensembl ID

Hilpda	ENSMUSG00000043421
Fam71f2	ENSMUSG00000079652
Fam71f1	ENSMUSG00000039742
Calu	ENSMUSG00000029767
Ccdc136	ENSMUSG00000029769
Atp6v1f	ENSMUSG00000004285
Irf5	ENSMUSG00000029771
Tnpo3	ENSMUSG00000012535
Tspan33	ENSMUSG00000001763
Ahcyl2	ENSMUSG00000029772

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arid3b	MA0601.1	chr6:29558794-29558805	CTAATTAATAT	-	6.02
Nkx3-2	MA0122.3	chr6:29559092-29559105	AAAAGCACTTAAA	+	6.03

Enhancer Sequence

GAAAAAACAT GAGCCCAAAA ATTTAACATG TGGAAATACG ATAGATACAA CACACACTCC 60
ACCACATGCT CACAAAAATA TGGACTAATT AATATAGCTA TGATAGCCAT CTTACAAATA 120
AAAACGTACA GGCAGAAGAA ATACAGTAGG AATCTGATAT AAAACAAAAG AACTACAAAG 180
ATTTCCTGAA ACCATAACTA ATTTTTCTTT ATATTACGTT GCACTCCAAT GAGAGGAGAA 240
AATTTGTACG AACACGAATC TAGAAGCCTG AGAAATTTCG AGAATAACAC GAATGAAAAT 300
CGGCAAGGGA CACTGAGGGG TGAGTAAGGC TGCCAAAGGG AAGGTATTGC CAGATGCAAC 360
TCTTGAATAC GGAAGGTGTA CCAAAAGCAC TTAAAGGAGA GCCAGACCAC AAGCGAGACG 420
TACAGAACTA CAAAACGGAT TCCACAGACG AGGGAAAGGG CCCGTTCGTG ACCAATCAGT 480
TGCCACTGGT TTCCGAAAGG CAGCACATCT GTGGCTGCTC AGCCCCACCC CGCGGCACCA 540
GCTCCTTCGG AAAGAGGATC TCCCACTGCC AAGCGCTCCA CTCAAGCGGA GAACCATCCC 600
ATCCCACTCG GCCCTGGTCC CGCGCGGCTC AGAACGGACT CTCCCCGAAC 650