EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM146-12468

Organism

Mus musculus

Tissue/cell

Testis

Coordinate

chr5:122475070-122475670

Target genes

Number: 11
Name	Ensembl ID

Brap	ENSMUSG00000029458
Sh2b3	ENSMUSG00000042594
Fam109a	ENSMUSG00000044134
Cux2	ENSMUSG00000042589
Ccdc63	ENSMUSG00000043036
Ppp1cc	ENSMUSG00000004455
Hvcn1	ENSMUSG00000064267
Tctn1	ENSMUSG00000038593
Pptc7	ENSMUSG00000038582
Gpn3	ENSMUSG00000029464
1500011H22Rik	ENSMUSG00000029463

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MITF	MA0620.2	chr5:122475316-122475334	TCGGGTCACATGACTTCC	+	6.08
MITF	MA0620.2	chr5:122475316-122475334	TCGGGTCACATGACTTCC	-	6.08
NFYA	MA0060.3	chr5:122475301-122475312	TCTGATTGGCC	-	6.02
NFYB	MA0502.1	chr5:122475302-122475317	CTGATTGGCCCGGTT	-	7.14

Enhancer Sequence

GTTTTTCGAG ACAGGGTTTC TCTGTATAGC CTTGGCTGTT CTGGAACTCA CTTTGTAGAT 60
CAAGCTCGCC TTGAACTCAG AAAAATCTGC CTGCCTCTGC CTCCCAAGTG CTGGGATTAA 120
AGGCATGCGC CACCACCGCC CTGCTCAGTT CTAAATTTCT ATTCGTTCAG GAACTCAACA 180
AGAGAGAAAA CCTCCTCTTT CCTGAGCCAA CTGAAAAATA CCAGGCAAGT CTCTGATTGG 240
CCCGGTTCGG GTCACATGAC TTCCCTTTAA GCCAATCACT GGGAGCACAT AATGGGTGTG 300
GGAACGACAG TTCCCCAATC TCCTTCGGTT GTCACAGAAT TGATGGAGAC ATAGGATGTG 360
TGATGGTCAC TCCAGGAGTG GGGGTGGCAT GGGGACAAGC CAAGGCATCT CTGCCACTCC 420
GTGGCCCCTG CCCACTTGCT GGTCCTAACG TGCGCAAGGA TCTGCCCACC TCACCAGGTA 480
GAGATCCCCA AGTCCATGAT CATGGAAGCT ACCTTACAAG GCCAGGCCAG CCACAGATAG 540
GGCCACACAC TGAGAACTTA GTATGTTCTC CATGCGTGGG CAACCCCACC ACCCCACCCC 600