EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM146-00768

Organism

Mus musculus

Tissue/cell

Testis

Coordinate

chr1:173823470-173824350

Target genes

Number: 9
Name	Ensembl ID

Ly9	ENSMUSG00000004707
Cd48	ENSMUSG00000015355
Cd84	ENSMUSG00000038147
Slamf6	ENSMUSG00000015314
Vangl2	ENSMUSG00000026556
Copa	ENSMUSG00000026553
Ncstn	ENSMUSG00000003458
Dcaf8	ENSMUSG00000026554
Atp1a4	ENSMUSG00000007107

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFYA	MA0060.3	chr1:173823862-173823873	TCTGATTGGTT	-	6.62
NFYA	MA0060.3	chr1:173823886-173823897	TCTGATTGGTT	-	6.62
NFYB	MA0502.1	chr1:173823863-173823878	CTGATTGGTTAACTT	-	6.58
NFYB	MA0502.1	chr1:173823887-173823902	CTGATTGGTTAACTT	-	6.58

Enhancer Sequence

TTATGATCAG TGGATTACAC CATCCCTTAG TGGGCTGTAA GGGCCAGGCT GCAGGCCAAT 60
GTGTTGAGGA AATTACTGTC GCAACTGCCC AGGTATCCAG GAGCCCTTGA AACTGCCCTC 120
TAGAAACAAA GTAAGCATGG GCCGTGAATC AGTTATTTTC TGTGCCCAGC AGACTTCCGA 180
GGATCCCAGG GAGGAAGGTC CTCGCTCCTA TTTCATATAA GGGAAATGGC AGAATAGTGG 240
GTCTTGCACG CGCTCGACTG GCCAGGAAGA ACGACGCTGC AATAGGATCC TTCTGCACAC 300
GTTTATTGGG AGAGCTTGAT TGTAGAGGCG AAAAGACCTC GAGCCCAGAA CTGGTGCTGC 360
TTTTATAGGC CTAGGACAGG CGTTCTCTCT CATCTGATTG GTTAACTTGT CTCTCATCTG 420
ATTGGTTAAC TTCTCTCTCA TCTTGGCAAA AGAACCTTTA CTGCCTATGT ATGTGTGGTG 480
GCCAGCAGTA GCCAACTGCC ACTCTGTAAC TGCCACTCTG TAACTGCCAC TCTGTAACTG 540
CCACTCTGCA ACTGCCACTC TGCAACAGCT TCCCACAAGT GGGAGTGGTA AGGCTTGGGC 600
TATGTGCTCT CCAGCCCTAA GGGTAAGTGG TCCCTGCTTG GCGGTGACTA AGATTTTTAT 660
CTCCCCATGG TAGTCGGTGT CATCCACTGT AGGAGTTACC ATTAGGCCTT GTAAAAGTCT 720
GGACACTCGG CCGATGACAA GAAAAAAGTC TTTTGGGGAG GGGGCCCAAA TTCACCTGTG 780
TTAACTGCTG TTAATTAAGG CATATAATAA TCAGGGGTGC CCCAGGCGGT ATCTGCACCC 840
AATGTGAGGA CACAGATGTC TACTTCTAAC TCGGGCCAAT 880