EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM145-00113

Organism

Mus musculus

Tissue/cell

Striatum

Coordinate

chr1:72290150-72291490

Target genes

Number: 4
Name	Ensembl ID

Mreg	ENSMUSG00000039395
Pecr	ENSMUSG00000026189
Tmem169	ENSMUSG00000026188
Xrcc5	ENSMUSG00000026187

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:72290546-72290557	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:72290547-72290557	GGGGCGGGGC	-	6.02
SP2	MA0516.2	chr1:72290544-72290561	GAGGGGGCGGGGCATGC	-	6.5
SP3	MA0746.2	chr1:72290487-72290500	GAGGGGCGTGGCG	-	6.18
SP4	MA0685.1	chr1:72290543-72290560	CGAGGGGGCGGGGCATG	-	6.18
ZNF263	MA0528.1	chr1:72290695-72290716	GGGGGAGGCAGGAAGTGAGGG	+	6.13

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03263	chr1:72282943-72301822	TACs
mSE_10125	chr1:72288734-72291052	Embryonic_stem_cells

Enhancer Sequence

TTTTTTTGGT CAAGATTTAC TACAGTTTTT ACCTAAGTAG GTTTGCCTTG ACAACATTGT 60
GAAAACACCT AACAGAAAAT CACTAGCCTG CTAGACTCCC TGTGGAGCCA GCCTCTCAAC 120
AAGGGAAGAT TGTCTTAAGA CAACGCGAAC TAGGAGCAGT AGGTCCACCC TTCAGCCACC 180
GTCCTGCCTC AGAGTTTATC CAGTGCATCT GGCCGTGGAC ATGCCCCCTT CAGGTCTTTC 240
TATTTCCGGT GGATTCCAAA CCGCAATAGT CTGTGAGTCG GCCTGTGAAT CGCGGAGGCC 300
GCGGGGAAGA GCTGATTTGC ACGTCCTGCC TCCACGCGAG GGGCGTGGCG ACGTGCACAG 360
GCCTAATTTG GGCTTGTGTT GTCACGCCCT TCGCGAGGGG GCGGGGCATG CAAATCATAC 420
TCGGCGTGCG CGCTCGGGAA CGCCGGGAGA GCCCGGGTCG TGGACGTTGA ATCTGAAGCC 480
GTGGGTGCTG GAGTGGGAGT GAGGTGTGGA GGGCGCAGAC GCGGATCGGA GGAGGAAGGA 540
ACCGCGGGGG AGGCAGGAAG TGAGGGTTGC GAGCGGTCAC CACAAAGGTA ATGTGTCTCA 600
CGGACGCAGA GCATGGCTGC GTGGTCTGTA TTTGGTATCG CTTCTCGGCC TTTTGGCTAA 660
GATCAAGTGT AGTATCTGTT CTTATCAGTT TAATATCTGA TACGTCCTCT ATCCGAGGAC 720
AATATATTAA ATGGATTTTT GGAACTAGGA GTTGGAATAG GAGCTTGCTC CGTCCACTCC 780
ACGCATCGAC CTGGTATTGC AGTACCTCCA GGAACGGTGC AACCCCTCTG GGGAACAATG 840
TTGGTTAAAT GTAAGACATT TAGGACTATT ATAGCTCGTA AATACAGGCT GCAGTTACTT 900
TTTCTGTCTT CTTTTCTACT TTGTAGTTAC CCGGGTCTCG TTAACCCCTC TTTGATAGAC 960
CAGGCTGGCC TCTAACTCGG AAGTCCGCCT GCTTGCCGCC AGTTGATCTT TTTCTATTGC 1020
TTTACTTTTC TTATTATTAT TCAGGTTTCA TATTTCCACT ACCAGGCTTT TCAGGCAGAG 1080
CAGCTCGCTT CTTTACTTTT TTACACAGTC TTTCCATCCA CTGGTCAATA ACTGTGATTA 1140
GGTGGGAAAG ACTCTAAGGT TTTTATCTCT TTTTTTCCCC TCTGGGGAAT AATGCTGGTT 1200
TAATAAGAGA CCTAGAAATT AGGCCAACGT GGATTTCTTA CCAACCTGTT AGTTTTACTG 1260
CACATCACTC TACATTGCTG CATAATATTC TACATAATGT CTAGCTTTTG ATCTGGAAAG 1320
AGCTGTGAGG CTGTAAGGTT 1340