EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM144-25261

Organism

Mus musculus

Tissue/cell

Stomach_neonate

Coordinate

chr9:108176810-108177470

Target genes

Number: 14
Name	Ensembl ID

Gmppb	ENSMUSG00000070284
Dag1	ENSMUSG00000039952
Nicn1	ENSMUSG00000032606
Amt	ENSMUSG00000032607
Tcta	ENSMUSG00000039461
Rhoa	ENSMUSG00000007815
Gpx1	ENSMUSG00000063856
Usp4	ENSMUSG00000032612
Klhdc8b	ENSMUSG00000032609
Ccdc71	ENSMUSG00000049305
Lamb2	ENSMUSG00000052911
Qars	ENSMUSG00000032604
Impdh2	ENSMUSG00000062867
Ndufaf3	ENSMUSG00000070283

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myod1	MA0499.1	chr9:108177212-108177225	AGCAACAGCTGCG	-	6.19
Myod1	MA0499.1	chr9:108177017-108177030	TGCAGCTGTTCCT	+	7.34
ZNF263	MA0528.1	chr9:108176925-108176946	CCCCCCCCCATCCCCTCCTTC	-	7.6
ZNF740	MA0753.2	chr9:108176923-108176936	CCCCCCCCCCCAT	+	6.07

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01135

chr9:108175116-108182700

Myotubes

Enhancer Sequence

GCAATTTTCC GGCTTCTGCC TTCCCTTCAA TTACATGCAT GCCCACCAAA CAAGGCTCCA 60
GACCTGTGGT ATGTAGAACT TTCCACACAT TTTTTTCCCA AGGTCTCTCC AGTCCCCCCC 120
CCCCATCCCC TCCTTCCCAC TAGTTCTTTC CCATACTCTG CAGCAGAAGG GCAGTCACCT 180
GTTACTGCCC ACCCCCTCCC CCTTCGGTGC AGCTGTTCCT GAACAGCTGG ATCTTTGTGG 240
GGCATTGCCC CCAGCTGGAC TGGGAAGGCT TCCTCTTCCA CTTGGTTTCT GCTGGCCTAC 300
CAATGGCTCC TCCTTTCATA TGTCCTTGGC CCCGAAATCT GGTGACCCTG GCATCTATGA 360
GCTACTGTGG GGCAGCTGTG GGATGCCTGC ACCCTTGCCA GGAGCAACAG CTGCGACTGC 420
TCCCAGTCTC CACAAGACCC AAGGTTACCT GACTCTTATC AGCATGGGAG TAAGGTGCCA 480
GCCTTACCCG GCACTCCCCT CTTGTCTTCC TGTGGCCAAG TCTTCCTTCT GATGATTTCT 540
CACATAGAAG TACAATGGTC CCCCAGAGGG GAAAGGCTTC AGGTTTCTGT CCTGCACTGG 600
TCTCTGCTTT CAGTAACCTG CTAATCCAAT CCCAATGTGG TAATAAGAGT GACCTTCCAA 660