EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM144-15498

Organism

Mus musculus

Tissue/cell

Stomach_neonate

Coordinate

chr3:89676040-89676920

Target genes

Number: 11
Name	Ensembl ID

Adar	ENSMUSG00000027951
Ube2q1	ENSMUSG00000042572
She	ENSMUSG00000046280
Il6ra	ENSMUSG00000027947
Atp8b2	ENSMUSG00000060671
Hax1	ENSMUSG00000027944
4933434E20Rik	ENSMUSG00000027942
Ubap2l	ENSMUSG00000042520
Tpm3	ENSMUSG00000027940
Rps27	ENSMUSG00000090733
Jtb	ENSMUSG00000027937

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXF2	MA0030.1	chr3:89676775-89676789	GCAACGTAAACAAT	+	7.14
RREB1	MA0073.1	chr3:89676224-89676244	CCTCCACCCACCCCACCCCA	+	6.57

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01443	chr3:89662044-89717426	Th_Cells
mSE_12287	chr3:89675852-89676990	Spleen

Enhancer Sequence

GTAAATATTT TTTAAAAAGA GGAGAGTATT CTTTCAGTGG GGAAGGAATA TGGAACTCCG 60
TCCAACAAAG GCTGTCAGGA GCAGATCACT CTCACAGCCT GCAATGGAGA GCAGAGAACA 120
GGCTGTGTGG TCCCTAGTAG CACTCTATCC AGCCCTCTAT ATTCAGTACC TCAGTCTCCA 180
GACACCTCCA CCCACCCCAC CCCAGCAGGG AGAGACTGCA CCCTCTGACA GGGGCACCAC 240
TGGGCACGTG TTGACTCATC TGACAGGAAA GTCAGTGGTA AGCCGGAAGA GATAGGCATC 300
GCCCTCATCA CAGCCTCCTC CGTGCGATGT CTGGGCCCGG GGCCAGGCTC AATAACCATG 360
AGAGAGTCAC CTGACAGCTG GAAGAAAGCT GAGCCACAGA TACAGATCTG CAAAGGTATG 420
ACGGGGGCTC CTTCCCAAGG GGCCCTTGGC AAGGTGTGCT GAACCAGGGC CTCCTCTCTT 480
CCCTTTGACT TCCTTCTCTA TGGCTGACTT GCTATGTACT GATTCCAAAG TGAGAATAAG 540
GTGACCCTCC CCCCCTAATC CCATCAGCTG CCATTACCTA AGGAAGTGCT AGGGTGGGGG 600
AGGGAAAGCC AATGTCATAA ACAAGAGTTG GGCATTTTTG GGGCTTGAAA CCAGCAGACT 660
ATTCCTTGTT CTTGTTATGA TAAATGATTG ATAGCTGGCT CTGGATCTGC CGTTGGCTCT 720
TGGCCTGTTA TCCAAGCAAC GTAAACAATC TGCGGAATGT TATTTGGCTG CAGGAAGACA 780
GCCCAGTTAT TGCGAAGGGG AGTGCGCTCA GTCACTGAGT GGAATTCTCC CTGTAAGAGG 840
ATTGAGGGCA GGCTGCTACA CCGTGGACTG AAAAGCATTC 880