EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM144-13158

Organism

Mus musculus

Tissue/cell

Stomach_neonate

Coordinate

chr2:29522210-29522570

Target genes

Number: 10
Name	Ensembl ID

Rapgef1	ENSMUSG00000039844
Gm9823	ENSMUSG00000048316
Gm13420	ENSMUSG00000079497
Coq4	ENSMUSG00000026798
Trub2	ENSMUSG00000039826
Slc27a4	ENSMUSG00000059316
Urm1	ENSMUSG00000069020
Cercam	ENSMUSG00000039787
Odf2	ENSMUSG00000026790
Gle1	ENSMUSG00000019715

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr2:29522280-29522291	GCAGGGTGTGG	-	6.62
Klf1	MA0493.1	chr2:29522282-29522293	AGGGTGTGGCC	-	6.32
TCF7L2	MA0523.1	chr2:29522316-29522330	TGCCTTTGATGTGC	-	6.3

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01414	chr2:29474307-29534500	Th_Cells
mSE_03216	chr2:29514489-29551626	TACs

Enhancer Sequence

TGTGTGTTCT CCCCACTGAG GTTTAAAAAT AAAGTCCATC CCCTATCCAT TACCCTCTCC 60
TGGTCTAAGA GCAGGGTGTG GCCTCAGCTC CTCCTCCCAA GCACTCTGCC TTTGATGTGC 120
GCCGCGGTGA GCACTGATTG GCCGCCTTTC TAGGAGCTGA TTTACTTTCA CTAGCGCTGC 180
TGGCCAGAAA GTCTCTCCTC TCAACTAGTG GAGACTTGGT TCCCTGCTCA GGGCTATGGG 240
CACATGTCGC AGACAGCTTC CATGCTGGGC ATATGGTTCA GAGAGGACAA TGAGGAGCCT 300
GACAACAGAG TTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GCTCTGCACT TGTTGGAAGG 360