EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM144-00938

Organism

Mus musculus

Tissue/cell

Stomach_neonate

Coordinate

chr1:137133480-137134170

Target genes

Number: 12
Name	Ensembl ID

Ppp1r12b	ENSMUSG00000073557
Ube2t	ENSMUSG00000026429
Ptpn7	ENSMUSG00000031506
Arl8a	ENSMUSG00000026426
Gpr37l1	ENSMUSG00000026424
Gm4204	ENSMUSG00000079139
Elf3	ENSMUSG00000003051
Rnpep	ENSMUSG00000041926
Timm17a	ENSMUSG00000062580
Lmod1	ENSMUSG00000048096
Shisa4	ENSMUSG00000041889
Ipo9	ENSMUSG00000041879

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR1	MA0112.3	chr1:137133978-137133995	GAGGTCACTCTGACCCC	+	6.49
ESR1	MA0112.3	chr1:137133978-137133995	GAGGTCACTCTGACCCC	-	6.72
ESR2	MA0258.2	chr1:137133979-137133994	AGGTCACTCTGACCC	-	6.73
ESR2	MA0258.2	chr1:137133979-137133994	AGGTCACTCTGACCC	+	7.05

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07141

chr1:137133434-137134430

Intestine

Enhancer Sequence

AAAAAAACAA ATAAACCACC CAAACCTGGA CTTTGTACCA TCAGGAAGCC TTATCACTTG 60
TATATGTATT CATACTAAGC TCTTTGTTAT TGGTTTTCTT TTGTTTCTGA GATAGACTCT 120
AGTAACCCAG GCTGGCCTCA AATTTGCTAG GTAGCCAAGT ACAGCCCTAA TCTCTGATCT 180
TCCTTCCTCC ACCTCTCAAG AGTGGGGGTT CTAGGCACAG GCCACCAGAC CCAGCTCATT 240
TCTTTATATT CTAGACAAAT AATTTTCCCT ACATTCATGA GTGATAACGC AAGTAAGGTG 300
GTAGGAGCTG AGGGTGGCAG TTGCCCATTC CAGCTAGACA AGGTCTAGTC TACCCTCTGC 360
CCCGTGGGTG TCTGCTCCAG GGCAGACCTC TGAGGCCCAT TGCAAGGCGG CTGGTTAACC 420
ATTGGCTCTG CCCCCGGGGT GAGGTAATCC AGGTCCCCAA GGGAGAGGCA AGAACCTGCC 480
AGCCTGCGCT GTAGGACTGA GGTCACTCTG ACCCCAGCGA AAATGTGTGA GGAGCCTGGA 540
TCTGGGGGCT CCATCCAGCA GAAGAATATT CCCTAGGGGC AGCGGGCTGC AGAAGAGCGC 600
CCAGGAGCCC ATGACCTGGT TTGAGTGGGC GACGGTGGGG CAGGGCAGAG AAGAAACTCT 660
GCAGATAGTG AGAAGCTGAC ACACTGTGGG 690