EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM141-08702

Organism

Mus musculus

Tissue/cell

Spermatid

Coordinate

chr3:87828390-87828950

Target genes

Number: 11
Name	Ensembl ID

Insrr	ENSMUSG00000005640
Prcc	ENSMUSG00000004895
Hdgf	ENSMUSG00000004897
Mrpl24	ENSMUSG00000019710
Rrnad1	ENSMUSG00000004896
Nes	ENSMUSG00000004891
Hapln2	ENSMUSG00000004894
Gpatch4	ENSMUSG00000028069
Ttc24	ENSMUSG00000051036
Iqgap3	ENSMUSG00000028068
Mef2d	ENSMUSG00000001419

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr3:87828880-87828897	TGACCTCCGGAAGACCT	-	6.11
Rarb(var.2)	MA0858.1	chr3:87828880-87828897	TGACCTCCGGAAGACCT	-	6.1

Enhancer Sequence

GTACTGAAAG GAAGGACAGA GAGGGGGGCA GAGATGAGGG TCGGCTTCCT GTTGGGTGCA 60
TGGAGGCATT TGTCAGCTGT AAGCCAACAA GCCTCACCTC ACTGATGACA GGTCATCCCA 120
GCCAGCAAGT CCTGACCTAG CATCTCCTTT CTGGGTCCCC CAACCCAGCT ACTCCTCAAC 180
CCAGCTACTC CTCAACCCAG CTACTCCCCA GGCCTTCCAT TGGAATTTGA ACCTCTGTAT 240
TAATTTGCCA GCATCACTTT CTACCCCAGA ACCAAGTTAA ATACAATAAT AATATGTGCC 300
CTGCTTGGAA GAGTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT 360
CTCTCTGATA ACGTGGAAGC GTCTTCACCT CAAAGGCTCC AGGCTCCCCT GCAGTCAATG 420
TTGTCTCCCC TAACTGACCT CCACACCCGA CTCTGTACTG GAATCCAGGC ATCCTGGACT 480
TAAGTGGGCC TGACCTCCGG AAGACCTTCC CTCACTCTCC AGTCTGCCTC ACTGTGGCAT 540
ATGAAGTTTC CTGGAGCAAA 560