EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM141-01161

Organism

Mus musculus

Tissue/cell

Spermatid

Coordinate

chr10:80881480-80883010

Target genes

Number: 31
Name	Ensembl ID

Lmnb2	ENSMUSG00000062075
Slc39a3	ENSMUSG00000046822
Sgta	ENSMUSG00000004937
Thop1	ENSMUSG00000004929
Map2k2	ENSMUSG00000035027
Zbtb7a	ENSMUSG00000035011
Pias4	ENSMUSG00000004934
Eef2	ENSMUSG00000034994
4930442H23Rik	ENSMUSG00000053603
Itgb1bp3	ENSMUSG00000004939
Atcay	ENSMUSG00000034958
Zfr2	ENSMUSG00000034949
Matk	ENSMUSG00000004933
Mrpl54	ENSMUSG00000034932
Apba3	ENSMUSG00000004931
Pip5k1c	ENSMUSG00000034902
2510012J08Rik	ENSMUSG00000034889
Hmg20b	ENSMUSG00000020232
Mfsd12	ENSMUSG00000034854
4930404N11Rik	ENSMUSG00000020234
Fzr1	ENSMUSG00000020235
Dohh	ENSMUSG00000078440
2210404O07Rik	ENSMUSG00000078439
Nfic	ENSMUSG00000055053
Celf5	ENSMUSG00000034818
Ncln	ENSMUSG00000020238
Gna11	ENSMUSG00000034781
Aes	ENSMUSG00000054452
Tle6	ENSMUSG00000034758
Sirt6	ENSMUSG00000034748
Ankrd24	ENSMUSG00000054708

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr10:80881534-80881549	TGACCTCTGACCCAC	-	6.6
Nr2f6	MA0677.1	chr10:80881534-80881548	TGACCTCTGACCCA	-	6.37
Nr5a2	MA0505.1	chr10:80882454-80882469	CCTGACCTTGACCAT	-	6.25
REST	MA0138.2	chr10:80882758-80882779	GCCCCTGTCCGTGGCCCTGCC	-	6.09
RXRB	MA0855.1	chr10:80881534-80881548	TGACCTCTGACCCA	-	6.19
RXRG	MA0856.1	chr10:80881534-80881548	TGACCTCTGACCCA	-	6.28
Rxra	MA0512.2	chr10:80881534-80881548	TGACCTCTGACCCA	-	6.12

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

mSE_03027	chr10:80864616-80896783	TACs
mSE_03693	chr10:80881310-80884233	Cerebellum
mSE_07969	chr10:80881472-80882945	Kidney
mSE_08356	chr10:80870055-80886111	Liver
mSE_12608	chr10:80881498-80883568	Testis

Enhancer Sequence

GACCCCCCCC CCCCAGCTTC CAACCCCCAC CCCAGCATCT TGTCACTGCA TCTGTGACCT 60
CTGACCCACA CAGCTGGGAG CTGATGGGAG GTGGGGGTGG TGCTGAGCAG AGGCTGAGGT 120
CAAAGGCAGT CAGACTCAAG GTCAGAGCTG GGGGAGACCC TGGTTGGCTT GACTGTGCCA 180
TTGTGGCCAC CGGCAGACAC GGCTGGAATC TGAGGCACAG AGAAGACATG ATCCACCTAG 240
CCAGGAGCAG CCTACCCGGC CCACGCTGTC CTCTCTGCCA TGCAGACTGG CTCTCAGGCA 300
GTGACCTACG CCAGCAATGT GGGTACTGGG GTACATGGGT GGCTTCTAAA GCCTCAGGAA 360
GAGCGTGAGC CACTGTCACC TCACAGCAGT TCCCCTGCCT CTGCCTCTAA GTTCTGCCGG 420
ACTACCCAAC AGCAGTTCGG GGTCCCATTA AGGCTCTAAC CTACCCTGAA GCCTACTTGG 480
GGGGCCCCAA CTCAACTAGG ATTAGAAGTG GGCAGAGCCA TGGCTGTCCC ATCCCATAAC 540
CTTTAGCTCA TCCTGTACAA AGTAGACTGG AGTGACCACG CCCCGTCCAG CCACTCCCAC 600
CCAGCACCAA GTCAGGCCCT GCTTAGGGTC TTGGTCATAG GCTGTTCTTC CCCTGCCTTA 660
GGTCCGTGGA CACCATGCCC ACTAACCCAC ACTCCCCAGG TGACACAGGG TCTGGTCAGG 720
TGGAGGCTAG CTCTTTGATG AATGGCCATT CCTTTCTGTG CTTGCTTCAT ACACTTGTCA 780
TCTGCCTACT TCTCTCAGGT CTGACAGAGC ACTGCTCACT GGGTTCTGCT TGGAAGTAGG 840
ACAGATATTC ATGGATGCTG ATCCTGATTG TGCCTCCCAT AGTAACCCAG CCCTGGCCCT 900
ACACCCCCAA GGCCTTGCCC TAGTCCATGG CACCAGATGG TGACTATGGC CTGACCCTTG 960
ACTGTGCGCC CAACCCTGAC CTTGACCATG GTCTCACCCC TCACCACCAC CAAGGCCCAG 1020
ATCCTGTGAG TTGACCGCAG CTTAGCCTCT GACTGTATCC ATGACCACCA TTATGATGCC 1080
CCTGACGACG ATCCTGAACC CCACCATGGC TCTGAACATG ATCCCACCCT TGACCCTGAC 1140
CATGGCCCAA CACTGATCCC TCCCCAACCA CAGACATCGC ATAGGTCTTG ACTATGACCC 1200
TAACTATTAC CTTGCCGCCG ACAATATCCT GTGTCTGACT ATGACCCTGT CTGCGACCCC 1260
TCTCCAGTCC ATAGTCCTGC CCCTGTCCGT GGCCCTGCCC CTGCCCATGA CTCTGACCAC 1320
AGCCTGCCCA TGACCACAGT GTTGCCTTTT GACCACGGTC CCTCCCCTGT CCATGGTCTC 1380
ACCCCTGACC ATGACCCAGC TCCTGACGAT GACCCTATCC AGGCTCCTAC CCCTGTCCAT 1440
GTCCCTCCCC TGGCCACACC CCCTCCTTGT ACAGGGTCTG GCCTCTGACC ATGGCCCTGG 1500
CCTCTCCATG CCCCACCCAC CCCACACTCA 1530