EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM141-00590

Organism

Mus musculus

Tissue/cell

Spermatid

Coordinate

chr1:173216050-173216480

Target genes

Number: 19
Name	Ensembl ID

Fcgr3	ENSMUSG00000059498
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Mpz	ENSMUSG00000056569
Tomm40l	ENSMUSG00000005674
Apoa2	ENSMUSG00000005681
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Rpl27	ENSMUSG00000079137
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Klhdc9	ENSMUSG00000045259
Pvrl4	ENSMUSG00000006411
Arhgap30	ENSMUSG00000048865
Usf1	ENSMUSG00000026641

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1	MA0154.3	chr1:173216264-173216278	ATTCCCTAGGGACT	-	7.31
EBF1	MA0154.3	chr1:173216264-173216278	ATTCCCTAGGGACT	+	7.82

Enhancer Sequence

TGGCCCCTTC TTGCACCCTC TCCTGCTGGC TCCAACTGCA AGCAGCCTAG CTCAGTTAGC 60
TCGGGAAATG GGGAACCACA CCAGCACAGG TGCTCTTGAC TCCGCCCCTC CGCAGCTCCA 120
GGGATTAATT AGGTCTAGGC CCAGTCCTAG GAGAGATGTT GCCTTAAAAG AGAGTGCCTA 180
AGGACCCAAG GAAGAATTCT AAATAGTCGG GCTAATTCCC TAGGGACTAG AATGGCACAC 240
CAAGTTGGAG AATCACATAC AACCCAAAAT AAGATCTAGA AGGTCTCAGA AAAGACAAGA 300
ATCCACTGGT GTAATGAGGA GTTGACAAAG GGACTCAGAG AAGGGAACAC AGGAAAGCCA 360
TAGTATGACA AAGTTGAAGG CAAGAGGAAC ATGAGCATGG GAGAGACCAC GTGTGCTGTC 420
AAGTCCTCAC 430