EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM141-00586

Organism

Mus musculus

Tissue/cell

Spermatid

Coordinate

chr1:173175900-173176220

Target genes

Number: 20
Name	Ensembl ID

Fcgr3	ENSMUSG00000059498
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Mpz	ENSMUSG00000056569
Nr1i3	ENSMUSG00000005677
Tomm40l	ENSMUSG00000005674
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Rpl27	ENSMUSG00000079137
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Klhdc9	ENSMUSG00000045259
Pvrl4	ENSMUSG00000006411
Arhgap30	ENSMUSG00000048865
Usf1	ENSMUSG00000026641

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3

MA0041.1

chr1:173176154-173176166

AAACAAACAAAC

6.32

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_09671

chr1:173175770-173182964

MEF

Enhancer Sequence

TCTTCCCCCC CCTATCTTTC GTTCTCTCCT CTCTAGTGAT AAGGAGTGAA ATAGGGGAGG 60
GGTAAAGAGG AGGGAAAAGG AGAAGCCACA AAATAGCAGA CCCGCTTGCT ACACTAGCCA 120
GGCAGCGGTG GCGCAGGCCT TTGATTCCAG CATTTGGGAG GCAAAGGCAG GTGGATTTCT 180
GAGTTCGAGG ACAGCCTGGT CTACAGAGTG AGTTTCAGGA CTCCCAAGGC TACACAGAGA 240
AATGTTGAAT TAAAAAACAA ACAAACAAAA AACATCAGCA AAGATTTCTG ACAACTTGAA 300
ACAGCAGCTC TTAGCACTCA 320