EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM141-00078

Organism

Mus musculus

Tissue/cell

Spermatid

Coordinate

chr1:37919760-37921860

Target genes

Number: 5
Name	Ensembl ID

Tsga10	ENSMUSG00000060771
Lipt1	ENSMUSG00000037216
Mrpl30	ENSMUSG00000026087
Txndc9	ENSMUSG00000058407
Eif5b	ENSMUSG00000026083

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CLOCK	MA0819.1	chr1:37920292-37920302	AACACGTGTT	+	6.02
CLOCK	MA0819.1	chr1:37920292-37920302	AACACGTGTT	-	6.02
E2F6	MA0471.1	chr1:37921718-37921729	CCTTCCCGCCC	-	6.62
Foxq1	MA0040.1	chr1:37920709-37920720	AATAAACAATA	-	6.62
KLF5	MA0599.1	chr1:37921766-37921776	GCCCCGCCCC	+	6.02
LMX1B	MA0703.2	chr1:37920810-37920821	TTAATTAAAAT	-	6.62
ZNF263	MA0528.1	chr1:37921734-37921755	TCCTCCCCAGTCTCCTCCTTC	-	6.69

Enhancer Sequence

CTTCCTATCT ACTGGGACTT TAATTTTTCA GTGAAATAGA AGTTAAGATT ATATGTTTAA 60
AAAATATCAG CAAAAGTTGG GAAGGGACAA AAGTCATTAA AGTTTAAACT TTTCTTAAGG 120
TAAACAACAA CAAAATCTTT CCAGTCATTC CAATTCAAGC TCCAAGCTCA TCTCGTTTCT 180
ACAATCCAAT CTCTAAAGAA ATTACTTATG TCCTCAATGA AGAGTGAAAC AAGACCTTAG 240
AAACACAAGA AAGGGGTCAG TTGTTCTCTG AAGGCTTTTC TGGACCAAAG GGATTAGTAA 300
CTTAAGACTA AGACTAATGG TGTAACTAAA ACAAAAAGCA CTACCTTTCC AACCGCCTCT 360
CCTCAAAACA TGAGATGCAT ATATTTTAAT ATCCATAACC CTGTCCGTTA TTTTAAAACC 420
TACTGTCCAC CAACAGTAAA TCGTGGTATA TCTTTACAAT GGAACACTAA CCAGCAAAGT 480
ACCTAGAAGC AATAAGGCTA CAATCTCTAA GTGTTAAGCA CAGAAGCTGT AGAACACGTG 540
TTACAATTCC TCTTATATAA AGTTCCATAA CAAGGCAGAC TGTATGCTGT GTGTTCACAT 600
AAGATGATAA AACTATTAGG AAAAGCAAGG GAATGCCTAA CATTGTCAGT CTGGGCAACA 660
AGCAAAGAGC AAGAGCATGT GATGCCTGAG AGAATAAATA ACACCTGTTC TAATGGCCCG 720
AATGCCTAAC ATTGTCAGTC TGGGCAACAA GCAAAGAGCA AGAGCATGTG ATGCCTGAGA 780
GAATAAATAA CACCTGTTCT AATGGCCCCT ACTTATGGAA AACTTTAAAA CCAAATTATT 840
TTTAAACAAA TAAGGCAGAA CCCAGAGACT CTCTCCTTGC CTGGTTATAG CTGGACTACA 900
ACAGTGATTC TTCTTTGGAA AGTAAGTAAA ACCTGTTTTT GAAACTGCCA ATAAACAATA 960
TCGAGGTTTG GAATTTCAAA GAATATTGAT GAATGTAATT TTACCTTATT TCTTTCTCAA 1020
TAATTAAGAC AGAAGAACTT AGTTTATTGT TTAATTAAAA TACAACTGGT TTGTTCTTGA 1080
AGCACAGTTA AATACGATAA CGTCCCTTTA TCTTAACAAC CTATTCTATT CCGAAATTAC 1140
TATGACTTTA TTTCCTGAAA GTGAACAAAA TGTACTCGAA GTCCTGAAAA CCAGAATAAA 1200
TTTGAAATGA CAAAGACCGT AGGTCACATA GATTTACAGG GGCTTAGAGA AAACAGCCAC 1260
TTGTGCAAAT TTTTCTTAGT GTCTAAATCG TTGACTGAGA GATATATACA AATACATGTA 1320
TCCTTATGTA CATATATACT TTTTAGGTAT CAAGTGCATG ACAGACTTGA ATAATTTTTT 1380
CAAACAAGAC AGCCTACCTT GCCTTTCTTC TATAAACTAT AAAGAGATTA TGAGATTTTT 1440
TTTCCATGCA AAATCTCAAT TTCTGCCTTC ACCTGCCTCC TAGTCTATTA AGAAGAGATT 1500
AAGAGAGACT GAGGGGTTCA GGAATAGACA GGCTGAGCTC CCAAATGCCA CAGCTTCACC 1560
TCACAGTGTC TCTAAGCAAA ACAGTCCCCC AACAACCAAG CTGAGGCAGG CAGCGAAGCG 1620
GTCACCATAG GAACTGGGCT CAACCATGAA CTCCCCTGAA ACTAGGGTAA GCTTTGCTCC 1680
TGGAACCCAT TCCCACCCGG CAGGTCCGCG ACGCAGCCGC CTAAGCAGCG ATGCCCAACC 1740
CGGGCCACAG TCAGGCTCTC CCCACCCTCT TGCAGCCGCC CCGGGATGGC TCTTCTCTAG 1800
CCCAGCGCAC CTCCGCGACT CCTCCCTGGA GCTCCGCAGC CCTCCCCCGA CCTCCCTGGC 1860
CGTCGTTCTC CCCGGAGCTC ATCCCGGCCA CTGAGGGGCC TCCGCCTCAG CGGGACATCC 1920
AGCCCCACCC CGGCCTCCAT CCTCCGCCCT AGTCTCCTCC TTCCCGCCCC TGTCTCCTCC 1980
CCAGTCTCCT CCTTCCCGCT CCCTGGGCCC CGCCCCGGCG GAGGCAGGCG CTCCGTGTGG 2040
CGCAGCGGGA AGAGGGCGGG AGCGGTTAGC TCCGGGCTGG CCGACGCCCC GCCCTCACGC 2100